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15-0527-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4358680 [Map]; Strand: c
      • AT1G12780.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 1
        Distance: -352; Region: promoter
    Flanking Genome Sequence: 15-0527-1 - 3-prime edge 
    GATAACACGC TAAAAACNGG CNNGGGCCGT NGNCCANTCG CGNNNTTTGT 
    GTTTTTTCGT TAAAGTTGTC CACTTAATAT TTATCTTTTA ACGATACCTA 
    AGATTGTGAC AGAGACAGCA GAGACCTACC GATAACGTTA TGATCAAATT 
    GATGACNGTG TATCTACAAC TTTTATTTAG GTATCCAATT TGGGTAAATG 
    TTGAAATGTT TTGGTACTAG AGTTAGCTAA TAGGATTTTG TTTTGAGAAG 
    GAATATATGT TTCGTATTTT TTTTTTTNTA ANAAAATNTG TNTTTNTGTA 
    AANAAATTTN NAAATNTNTT CNNAANATNA ATTTTGCNTN ANTTNGCANG 
    TAAAAANGGN AAATTTTTCN ATTNGTCNNA AATNGGGGGT AAAATNTTTN 
    NCTTAAAAAA ANGGGGGANG TAAANNATTT TNAAATCCGG ATAACNTANG 
    TAAAAATCCA AAANTTTNTA ANNGCAAANC CTTTTCNNAN GGGTTTGGTT 
    ANCTNGGNNT TTTGGCTTAA AANCAAANAA NCCCAAAANC CCGTANCTTT 
    CANCAAAAAN AAAANCANGG GGGGGNNTTT TTTGGNCTTA NCCCTCAAAN 
    TTNTNAATCA ATNTACNNAA CGTTTTCACN ATGCAATTTG GGGTTCCNGC 
    AAACNTTAAA AAAAGTTTTG GTNCCGANNT TTTTNGTTTA AGGTNAAANG 
    NCAAACCTTT AACGGGAANG GNNNNNATAA AGGNNCTTTT TTNAAAAAGN 
    GCTGNNNAAA NNNAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4358564 [Map]; Strand: c
      • AT1G12780.1 - [+] show detail - UDP-D-glucose/UDP-D-galactose 4-epimerase 1
        Distance: -236; Region: promoter
    Flanking Genome Sequence: 15-0527-1 - 5-prime edge 
    GTGTTATCCA ACCCATAGAA AATTTATCTC TCTGTTTTCC CATAATCCTC 
    GTAGATTTTG GTCATCACTA GTCATTTATT TACAAAAATA GGTTAAAAAT 
    GTCATTGCGT AAAAAGAAAA GAAGACTTTA ATCTTACATT ATTTCCCTTT 
    TAATTATTAA AATCCGCCGA GAAAAGTTTC ACCATCAATG CGTAACTGAA 
    AATCGACGA

AT1G12780.1

Model type
Protein coding
Short Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 1
Curator Summary
Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.
Computational Description
UDP-D-glucose/UDP-D-galactose 4-epimerase 1 (UGE1); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress, galactose biosynthetic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 3 (TAIR:AT1G63180.1); Has 42430 Blast hits to 42420 proteins in 2995 species: Archae - 799; Bacteria - 25009; Metazoa - 650; Fungi - 500; Plants - 1081; Viruses - 38; Other Eukaryotes - 14353 (source: NCBI BLink).
Link
InterPro Scan - TAIR