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15-0548-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4904438 [Map]; Strand: w
      • AT1G14345.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 4459; Region: intergenic
      • AT1G14350.2 - [+] show detail - Duplicated homeodomain-like superfamily protein
        Distance: -3515; Region: intergenic
    Flanking Genome Sequence: 15-0548-1 - 5-prime edge 
    CTTAANGCGA NNGGCCNCCC NNTNNANCAG TNCCTCGGGG NANAANANTA 
    CCCATTCANG GCNNTGATCC GATACTTCAC CCTAATCATT TAACAGCAAA 
    ATCAACATCC AATTACACGG TTCATGTATC CATTTAAAAA GGATTAAAAG 
    AAGAAGAAGA AGAAGAAGAT AAAGTAGTAA AAGAAAATTT AAAAGGCATC 
    GAATATTATA AAGACCTAAG ACTNCGTNGG ATNAATTNTA AAAGAAAATT 
    AAAAAGTGAA TGAGCNTGTA GTAGTAGTGT AAAATGTGAA CTAAAAGGAA 
    GGCTNTTGTT GAACAAAAAA AAANAAAAAA GGAAGGCTTT TACCNAGGGT 
    TCCATTATTT ATNATAA

AT1G14345.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); Has 297 Blast hits to 297 proteins in 86 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14350.2

Model type
Protein coding
Short Description
Duplicated homeodomain-like superfamily protein
Curator Summary
Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.
Computational Description
FOUR LIPS (FLP); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 88 (TAIR:AT2G02820.2); Has 8538 Blast hits to 7627 proteins in 543 species: Archae - 0; Bacteria - 2; Metazoa - 904; Fungi - 528; Plants - 5146; Viruses - 6; Other Eukaryotes - 1952 (source: NCBI BLink).
Link
InterPro Scan - TAIR