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15-0564-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6311673 [Map]; Strand: w
      • AT1G18335.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: -347; Region: promoter
      • AT1G18340.1 - [+] show detail - basal transcription factor complex subunit-related
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 15-0564-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGG 
    TCAGTCTAAA CTTGATGATG CTTCATCTGC CTCTGATAAG AAGAGAAAAG 
    CTCCTAGTAC CTAAAATCAT CTTTTGTGCC AGAGAGAAAC TGCAAACTTT 
    GTTTAATTGT GTCTTTGCGT TCATTTTCGA TAATTTTTAT ACCATATATC 
    AAAGTGAAAT CAATTTTGCA AAGTTTTTGA CTCTTTTTTT TTCCTTGANA 
    TAGTACCCGT TGACTTGAGC AAACAAAACA AAAAGGCCTC TAATAGTCCA 
    TATANAAAGT TGGGCTTCTC TATCGAATTT GAACGAATAC NACATTTGGG 
    CTGACGTCAT TTATTATTGT CGGATCTATT TCGGGTCCAA ACCCGTTTGA 
    TGGATC

AT1G18335.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G18340.1

Model type
Protein coding
Short Description
basal transcription factor complex subunit-related
Computational Description
basal transcription factor complex subunit-related; FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: core TFIIH complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb4 (InterPro:IPR004600); Has 359 Blast hits to 354 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 143; Plants - 47; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR