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Mutant Lines
15-0600-1

15-0600-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17885094 [Map]; Strand: c
  - AT4G38090.4 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -273; Region: promoter
  - AT4G38090.1 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -368; Region: promoter
  - AT4G38090.2 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -368; Region: promoter
  - AT4G38090.3 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
    Distance: -368; Region: promoter
  - AT4G38092.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -246; Region: promoter
Flanking Genome Sequence: 15-0600-1 - 5-prime edge
```
ATTAGAATCA ATTGCATGTG AAAAAAACTG AACTTTGATC AGATTGATAG 
AAGAAACAAA AATGTAAATA ATAACAACAG GAGCTAGCAA CATGTATACT 
ATTTCACTTT TTTTAGAGTT TCTAAGCCAA TCAGAATGTT CTATTTCACA 
CCCACTCGCA CAAAGTGAGC GTTGAGCGCG TGAGAGCAAT TCTGTGGGTG 
TACCCCTTTC CAAATCATGC CTTTTTCAAT CTACGCACTA GTCTCCAAAA 
TTCTCATCGC GTGAAAATTT GTTTGTTTTC TTCTCTAAAC CAGTATAAAC 
CAAACCGCAA ATCAATTCTA ATTTCAATAC CAATGTATAC CGAACCTAAA 
AATCAATTTT AATTTCAAAT GTTACTATCA AATGTTTTCT AATCTAGTTT 
AGCAATTAAA TTGAGAAGAT TATAATATAG CTAGCTAGAC GGCAAAAAGG 
CAACAATCAG ATGTGGGTGG GCGTACCGGT AGCAGCAGCA GTAACCACCG 
TCGGCGGCCG CANAATACCG GTGTTAGTGG CTGCATCAGG CAAGAGGTCG 
ATGGCTTCGA ATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 17885210 [Map]; Strand: c
- AT4G38090.4 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -389; Region: promoter
- AT4G38090.1 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -484; Region: promoter
- AT4G38090.2 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -484; Region: promoter
- AT4G38090.3 - [+] show detail - Ribosomal protein S5 domain 2-like superfamily protein
  Distance: -484; Region: promoter
- AT4G38092.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -130; Region: promoter

ATTCTAATAG AGTTTTTAGG TTATTTTGAT ATCATTTGTA TGTCAAAAAC 
ACCAAATTTT GTGAATTTGT ATGCTGGCAA TGTTTCATCA TTATAAACGA 
TTCTGTTTTC ATAGAGTAAA AAACAGAGGA TCAAAAAACA ACNTTTTTGG 
AAAATCCCCT TTTAGGTTTA TATGTATCAT TGCCATGTAT ATTCAGGTTG 
TTGCTTCTTC TTTCTTCATA CATATATGCA TAAACAAGTG GTTCGCTCTA 
TTCCTGGTTG ATCGTTTTGG TTTCCTAATA TACTTGGAGG AACATGTGTG 
TGTGTGGTTG CATTTATGAA ATTGTTTTTT TTTATGTTTT CTTGTAATTT 
GTTNGGCTTG AAATTGAAGT CACTGTANAG TATTGAAAAT TATCAAGTTT 
TCTTTTTTAT GGNGTTTGTT TATCTCCACG TCTCTGTTGA CTAAGGNGTT 
ANANACTACA TGTCTCACTG AACTAGTTTA CTATTACCGT CTTTCTGAGT 
TTATATGAAG TACNAAGTCT CTTTGCTTAT AAAAGGCTTG TCATGGTCTT 
TGTTTGNGCT TACCTCATGT GTACTTGACA TTTCCCTTTC TTTCGTACAG 
ATTAATAGTA ATCCAGTTGC TGCTGAGGCA ACCATTTTGT CGNTTCACCA 
ATCCCCACAG CCGTATAAGG CGTGTANATA TATTCTNGGT AAGTCTTTCT 
GATGAATCCA NAACCGGCCA AGTGGACTTG GGAAGNTTCA TCTGTTTGAC 
TGAAAGTG

AT4G38090.1

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.2

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 3816 Blast hits to 3816 proteins in 1926 species: Archae - 79; Bacteria - 3485; Metazoa - 43; Fungi - 32; Plants - 52; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.3

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38090.4

Model type: Protein coding
Short Description: Ribosomal protein S5 domain 2-like superfamily protein
Computational Description: Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0029, Impact, N-terminal (InterPro:IPR001498), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568).
Link: InterPro Scan - TAIR

AT4G38092.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR