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Mutant Lines
15-0617-1

15-0617-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 7654023 [Map]; Strand: w
- AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
  Distance: -161; Region: promoter

ACAACAACTC TGGATTTTGT TGTATCACTC TGTCTAATGT ATAGTATTGA 
GTGGATTTGC CTCTAGTTTG GTGTACCGAG CCTCTCAAAT GGGCCGAGCC 
TTTCAAATGG GCNTGTGACT AGGCCTAATG ACTTGTCGAC ATCGAATGTC 
GGCACAAAAT ATGATAATTT TGTCGATGTT GAAATCGTAC GTTTTTTGTT 
TTAATTAGAT GAGTCAGCAT CAGGAGGATG AAGTATCGAC CGACACGTGT 
CCGTTGCGTC CCAAAGTAAA GCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7653907 [Map]; Strand: w
  - AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon4 (3UTR)
  - AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon5 (3UTR)
  - AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
    Distance: -277; Region: promoter
Flanking Genome Sequence: 15-0617-1 - 3-prime edge
```
GTTGTTGTTA GTTACACACA CAGAAGAGAA CAAGAAGACT ATAAACAAAA 
CACCATCAAG CTGAAATGTT CAAAGTATGT GTGTAAGTGT ATATTAGACC 
GGTTTCCACA CAGACAAAAC CTCTTGAAAC ATCTCCAGCA TCAGTTCTCG 
ATCAGCTTGC CTGAAGAAAC TGCTGATTTC TTCTCTGACA TCATAAATCT 
TTCCGAAATC AAACAAATAC ATCAAACACC CTTTCTTCAG TTTCTCCAGC 
TGATAAAGCC AAGCT
```

AT1G21780.1

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.2

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21790.1

Model type: Protein coding
Short Description: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR