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15-0662-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9967294 [Map]; Strand: c
      • AT1G28390.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G28390.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0662-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCTAC CGTGTGTTAG ATCGACGGCG AAGAAACGTC 
    CAGATATGTT AGAGGTTGTT GAGTGTTTGA AAACGGTGAG GAAGTTATCT 
    CCGGCGTGGA ATAAACTGCG GCGGAGGAGT GAAGAGAGAT CGGAAAATGT 
    TTTGGCGGTT GAGGAAGAGA AGGAAGAGAT TCATGTGAGG ATTGTGAGAG 
    GAGGAAGCAG GAAGAATCGG AAGGTATCGA ACGTGACGAC GAGTGTGGAT 
    GATGTTTACG AGAGATTAGT TCCGGAGGAA ACGCTGCCGT TTCGTCGTCG 
    GAATTTTGTG CTGAGATCGA GATCAGTAGG AGCGAAAGTT GGACCGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9967294 [Map]; Strand: c
      • AT1G28390.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G28390.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0662-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCACA 
    CACCTAGCCG CCATAACGGC CAACTTCCGA ATCACGGCGT AATAAGGACG 
    GTTCTTAATC TTCAAATCAC AAATCGCGTC GTAATCGCCG CGTTTGATAA 
    GCGGCACCGC CCAATCAACG ATACACGACG GACTATAATT CAAATCAATG 
    GCTTCTCTAC CACTAATAAT CTCCAACAAC AATATCCCAA AGCTGAAAAC 
    ATCGCTCTTA GCCGTCAAGT CCGCCGGTGC TAAGTACGAC GGATCTAAAT 
    ATCCCAACGT ACCCGCCGGC GGAGTATATT TCAAACGCTC ATCGTCAACG 
    TTTCCGATCA ATGCTAATCC GAAATCAGCT AACCTAGCGT TACCGTCACC 
    GTCTATTAAA ACGTTACACG ATTTAATGTC ACGGTGGATC ACTTGAGTCT 
    CTGCGGTGTG AAGAGCGTGG ACAGCAATCG CGATCTGAAG CGCGTGTTTA 
    ATTCTCCGAT TCCAACTACT TAACCGTGAA TCTAACGAAC TACGAGAATG 
    TAACTGATCG TGAAGCGTAC CGTTAGGCAT GTACTCGACG ACTAACAGCT 
    TTGTTTTCCT CCGGTGGTCA ACGCAGTAAC CGATTAAGTT GACCATCCAA 
    CGGTGACGAA CCCGTGAAAG AATCTCGATC TCATTGTCTA CCTGACTCAC 
    GTTGTTATTG TTATTACCAA CGGTAGTGGT GATTGNTGTT CTCTTG

AT1G28390.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1); Has 101909 Blast hits to 100959 proteins in 2971 species: Archae - 79; Bacteria - 11366; Metazoa - 36596; Fungi - 8457; Plants - 30559; Viruses - 339; Other Eukaryotes - 14513 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28390.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G51990.1).
Link
InterPro Scan - TAIR