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Mutant Lines
15-0720-1

15-0720-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8957161 [Map]; Strand: c
- AT1G25500.1 - [+] show detail - Plasma-membrane choline transporter family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G25500.2 - [+] show detail - Plasma-membrane choline transporter family protein
  Distance: 0; Region: exon2 (CDS)
- AT1G25500.3 - [+] show detail - Plasma-membrane choline transporter family protein
  Distance: 0; Region: exon3 (CDS)

TTTGTGATCC ACTTGATTTG TTTGGGATTT GTGCTCGCGG TGCTTGGACT 
CAATAGGTTT AGAATATCAG ATAGGTTAAA CATCGATAGG TACACTCAAG 
GGTTCTTGGA GAATCATAAA GGTCTAACAG AGGATTACNT GGCCTCTCTA 
TGCTGTTGCT GGTGGCATTG GAGTCTTTAT CAGTTGGGTT TGGTCATTGC 
TGCTTGGCTC TTACGCCAAT GAGATGATGA AAGTTTCGGT TCACATCTTA 
ACAACCTATC TAGCTGTAGT TAGTGTACTA TGTTTCTGGT GCAGACTGTT 
CTTTTGGGGC GGTGCATTCG CTGTTGGATC TCTGTTGCAG TTCTTGTATG 
TTATTTCAGT TATAGACAGG TGCGTCCGAG GTTGAACTGG TTGAACTATG 
ACTGAACCCC TATGGTCAAA TGGCAACAAC TTTTTAGTTC TGATGATTTG 
AGTTGTTCAT GTGTAGACTT CCTTTCACAA TGCTGGTCCT ACGGAAAGCG 
CTGAAATTAG TCTGGGGACT TCCTAAGGTG ATAATGGTGG CACATGCTTT 
CACAGTAGTC ATGCTTTTGT GGATGTCTCT ATGGTCTTTT GGAGCANCTG 
GTGTTGTGGC ATCNANCATG GGCCGATGAG GGACGATGGT GGCTTCTTGT 
GGTGAGCTGG CAAGTTTTTG CA

AT1G25500.1

Model type: Protein coding
Short Description: Plasma-membrane choline transporter family protein
Computational Description: Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25500.2

Model type: Protein coding
Short Description: Plasma-membrane choline transporter family protein
Computational Description: Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 973 Blast hits to 970 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 448; Fungi - 169; Plants - 182; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25500.3

Model type: Protein coding
Short Description: Plasma-membrane choline transporter family protein
Computational Description: Plasma-membrane choline transporter family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603); BEST Arabidopsis thaliana protein match is: Plasma-membrane choline transporter family protein (TAIR:AT5G13760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR