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15-0750-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2844616 [Map]; Strand: c
      • AT3G09260.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -835; Region: promoter
    Flanking Genome Sequence: 15-0750-1 - 5-prime edge
    CCAGTATCCA CATAAAGAGG AGTGGTGTCG CTCACCCAGT CACCCTTGTT 
    ACTTGTTAGA TAGCATAAAT ACATTTGTAA GCAACAGCTT ATCTGATAGA
    CATGTCTTAA TTGGGAAATA TGCTCTATGA TGATACAACC ATGGTTCCAA
    CTGTTGACCA CCATAACTGA TAACATGTTG ATTACATTTT TTCTTTTCAG
    TTATAACGAT TACTTTTTTG GGGAAATTAT TGATATAATA TGATTCATTG
    GATGATCCGA TATCATGCAT ATAAAGTTGT ATCTCGTGAA ACACGAGATA
    GTATTATACT CCATTCTTTC ATTATCGGAG TATGTTTAAA ATTTGAAAAC
    AAATACAGAC ACGGACCGTG GTCTTTACCT TCAGAAAAAA AAAGGAGAAA
    AAAAANCCNT NCCCCNGTTN NTTNNNGNAN TNGNAAAAAA TNGGNCANCA
    ATTTTCAATT NNAGTTTTTT TNNGGNCCTT NTTNTTNTNG GGGTTNCCGG
    GATTTTCCTA AANAAAAAAT NCTTTNAATT TCCNNATTTA AAAAAACCCC
    CGTGGGACNC CCGGAATTTT NTTNNTTTTA AANGTTAAAA AANTNAAANG
    AAATTCCCCN NTNNGNNGGG TTTAAAGNNT AAACCCNNCC NAAAAAAANC
    NCCNNTTNAA AAAAAAAAAC NGGGGCCNTN NGNTNA

AT3G09260.1

Model type
Protein coding
Short Description
Glycosyl hydrolase superfamily protein
Curator Summary
Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.
Computational Description
PYK10; FUNCTIONS IN: beta-glucosidase activity, copper ion binding, hydrolase activity, hydrolyzing O-glycosyl compounds, fucosidase activity; INVOLVED IN: ER body organization, response to salt stress, response to symbiotic fungus, cellular response to cold, response to osmotic stress; LOCATED IN: peroxisome, nucleus, vacuole, membrane, ER body; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66280.1); Has 11331 Blast hits to 11008 proteins in 1473 species: Archae - 140; Bacteria - 7847; Metazoa - 701; Fungi - 200; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Link
InterPro Scan - TAIR