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Mutant Lines
15-0810-2

15-0810-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity /structure development stage	Phenotype
fruit (PO:0009001)	abnormal (PATO:0000460) (Fruits (Siliques)::abnormal shape)
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997) (Seed yield::semi-sterile)

Anatomical entity
/structure development stage

Phenotype

fruit (PO:0009001)

abnormal (PATO:0000460)
(Fruits (Siliques)::abnormal shape)

seed (PO:0009010)

present in fewer numbers in organism (PATO:0001997)
(Seed yield::semi-sterile)

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 2682285 [Map]; Strand: w
- AT4G05200.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 25
  Distance: 0; Region: exon1 (CDS)
- AT4G05210.1 - [+] show detail - Trimeric LpxA-like enzymes superfamily protein
  Distance: -582; Region: promoter

GTGGTAGAGA TAAGTTGGAT CTGAAGTAAC TGTCTTCAAG ATCATAAACA 
AGAAAACTGA GAACAGAGAA ACAGAGGATT TGAAACAAGA AGACATGTTT 
TTGTTTTCTT TGCTCTTCTT CTTCTTTGAG TTTCTTAATA TAATCTTCAT 
TGGAATTAGT GGGATTCAAA GTCTAATTAC TACAGTTAGT CATTGATAAT 
TAAGATTGTT TAAATCAAAT TATTATGTTC AAACTTCAAT ATTCCATAGG 
TTAGGCAGGC CTGTCTAGAT AATGAAATTA AAATGTGCTG TTGTAATCAT 
TGACATAATA ATATGATTAA AAAACATATT TGGTCAAAGG TTTCGGGGAA 
TCATAAAATT TATAAATTCA TCAAAATTGT TTTTTTTTGT CATCAAATTT 
TATTTANAAC TCATAATAGC CAATCCTGAG TAACATTGTT TACAAAAGTG 
ATATGAAGCG GTTTCAANAT TGTTTGTTGA GTATAAAATA TTACATGGAA 
ATGTTGATTT TTTAGTTCTA ATTTGTTTTG TTAAAANAAA NAGTTTAAAG 
CT

3 prime edge [+] show sequence

Chromosome: 4; Position: 2682169 [Map]; Strand: w
- AT4G05200.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 25
  Distance: 0; Region: exon1 (CDS)
- AT4G05210.1 - [+] show detail - Trimeric LpxA-like enzymes superfamily protein
  Distance: -698; Region: promoter

TCTACCACAT ATGTCCAAAC ACAACAACGT ACTCAAGAAA CAGCAGTTAC 
TTAACCAATC TCCGAACTGT TCTTTCATCT CTCTCCTCTC CAAACGCAGC 
TTATGCATCG CTTTTTGATA ACGCAGCCGC TGGTGAAGAG AACGATAGCA 
ACAGAGTATA TGGTGTTTTT CTCTGCCGTG GAGATGTCTC AGCCGAAATC 
TGCCGTGACT GTGTCGCGTT TGCAGCCAAC GAAACGCTCC AAAGGTGTCC 
AAGAGAGAAA GTGGCAGTGA TTTGGTACGA TGAGTGTATG GTAAGATACT 
CTAATCAAAG CATCGTAGGG CAAATGAGAA TTAGACCTGG TGTTTTCTTG 
ACGAACAAGC AAAACATCAC AGAGAATCAA GTGAGCAGAT TCAACGAGTC 
TTTGCCTGCT CTGCTCATAG ATGTTGCGGT GAAAGCCGCT TTGAGCTCGA 
GAAAGTTCGC TACGGAGAAA GCCAATTTCA CGGTTTTTCA GACAATCTAT 
AGCCTTGTGC AGTGCACTCC GGATTTGACT AATCAAGATT GTGAGAGCTG 
TTTGAGACAA GTCATTAATT ACTTGCCGAG ATGTTGTGAT CGAAGCGTTG 
GCGGGAGAGT AATCGCTCCG AGTTGTAGCT TCAGATATGA GCTTTATCCA 
TTTTACAATG AAACTATAGC TGCGGCTCCG ATGGCTCCTC CTCCTTCGTC 
AACGGTGGCT GCACCACCAC TGAATATTCC TTCANAAAAA GGTTAAAAAT 
CTTGAAACTC ATAN

AT4G05200.1

Model type: Protein coding
Short Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 25
Curator Summary: Encodes a cysteine-rich receptor-like protein kinase.
Computational Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 25 (CRK25); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1); Has 124291 Blast hits to 122724 proteins in 4390 species: Archae - 112; Bacteria - 13863; Metazoa - 45275; Fungi - 10764; Plants - 35367; Viruses - 449; Other Eukaryotes - 18461 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G05210.1

Model type: Protein coding
Short Description: Trimeric LpxA-like enzymes superfamily protein
Computational Description: Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G21220.1); Has 11511 Blast hits to 11440 proteins in 1956 species: Archae - 52; Bacteria - 7646; Metazoa - 8; Fungi - 29; Plants - 63; Viruses - 3; Other Eukaryotes - 3710 (source: NCBI BLink).
Link: InterPro Scan - TAIR