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15-0829-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1212723 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-0829-1 - 5-prime edge 
    GTTGCAGCTG GAGTCGCCTC GGTTTCGCTT CACCAATGTT ATGGTTCCAT 
    CTTGATGCAG TACTTAGCTG GTCGATCGAC AATCACTAAA GAGACTGTTG 
    AAGTTCTGCA AACTGCAGGG GAAGCTCGAA AAGGTTCTTG TGCAGATGGT 
    GGCAGAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1212839 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-0829-1 - 3-prime edge 
    GCTGCAACCA AGTGCCATCT CTTAAGTATC GGGCTAAAAC ACTCGCTCTC 
    GCGCAAAGCA AGATCCTCTG TCTCCTTAGC TAGCCGAAGC AACATAGTTG 
    CCGCTTCTTC TTCTCCTTCC TCTGTTTCTT CGATTTCGGC CTTCATGTTT 
    TCTATTACCT TTGAGAAGGC GTTTTTAATA GATGCTCTTA TATAGTAATC 
    GACGCGATCC CCTGAAGAAT CCACCAATTT CACATCACCT TTCTCTAGAC 
    CATTCATTTG AGAGATTGTC ACGTCCTCCC CCAAGATCTT AGAAGAAGAC 
    AACGCTAATG GCAGAAGATT CTCGATCAAT CCCACGTTCC CTCGTTGAAA 
    ATAATCATGA TAGCTCAACA ACCTATAATC ACACATTCAC AATCAGATTC 
    AGTTTTGTGT GATCAAGTCC ATTTACAAGG CAAAAAGAAA TACCTTTTTT 
    CAGTCCATCC TTGCATAGAG GCCAATGTCG AGGTCAAGAG CTTCACGTAA 
    AGAGCCTCGC GATCAGACTT CTTGGCGTCA TTGGCAACTT CAGCCAACAT 
    GGCGTGAGAG GCACCAAGCA AGTCTGGCTC CATCTGTGAT GTCACAATGT 
    ACTGATGAAA CAGAACCCAA GTGAAACACC AGNCATGNCT AGGCTANCNN 
    GNCGCCANCA TTGNNCNGGT NTNATTCATG GNNTTAAAAG CTNATNNATT 
    TNNTANNAAC CNGGNNTNTN ANGTNTGNNA ANATNNACTG NAAANCNCCN 
    CN

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR