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Mutant Lines
15-0842-1

15-0842-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8978760 [Map]; Strand: w
- AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
  Distance: 667; Region: intergenic
- AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
  Distance: 2917; Region: intergenic

ATCANTGCTG TCCAAAGNAT ATGTCTCTGC CTTTTTAAAA AAAGTTTCGA 
TATTCTCTGC TCTTTGAAGT TATCTTAATA TCTTCTTGTG ACAAAAAAAG 
TTATTGGTAT CATTCTTGTA AAACGAATCG AACGTTTTTC ATTTTGGTAT 
CATTCTTGTA AACGAATCGA ACGTTTTTCA TTTTCATGAT AATTTCACAA 
TATTTTTGTT CAGCTCACCA TTATTTCATT ATATTATTCA TTACCCCACC 
ATATATATCA ATAATACAAG TCATCACCAA TGTTAATGAC TTGTTGAACA 
TATACTACAT TACTATATCA AAAATGTTCA TGGGTATTCT ATGAAACGTA 
GTAACGTACT GTGATTTTTT CAATAAATTA CAATTTCAGA AAATACTTCT 
TACTTTTTAT AAACGAATAC ATGTAACGCC TACTATTTTC AAACGGATAT 
CTTGAAATAC AAAGACAGTG ATCCATGTAA TCAGGAGATA AATATCATCG 
GATTCAAATA TCTTGAAATT GCGTTAAACA CCTCTCTAAA AAGAGGTTGG 
ATTAACAAAG CTGCTGACCC TTACCTTCTC CTAAAGGCCA AGTGGCCCTC 
CCTTTACCTC AAATACAGCT AACCATCACC TATTTATTTA TGAAGAAGAT 
ATGTTTTGAT ATTAGATATT TTTTGGTTTA AATTTGAATC TTTTCTTCCA 
AATGTAAACA AGATGTCAGC CTTTCCTTAN TAAACCAAN

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 8978644 [Map]; Strand: w
  - AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
    Distance: 551; Region: intergenic
  - AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
    Distance: 3033; Region: intergenic
Flanking Genome Sequence: 15-0842-1 - 3-prime edge
```
GCACTGATAT CATTTTTTTC AAAAGAAAAT GTATTNGGTA AGGAATCATT 
TNTCTTGTGA TTCTTTAATC AGTTGCATGA AAAATGCCAA AACAAATATA 
TGCCTTCTTC TTTTTTGAAA TTCAGAATAT TCAGGCCACG GGG
```

AT1G25550.1

Model type: Protein coding
Short Description: myb-like transcription factor family protein
Computational Description: myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1641 Blast hits to 1637 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1615; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25560.1

Model type: Protein coding
Short Description: AP2/B3 transcription factor family protein
Curator Summary: Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description: TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link: InterPro Scan - TAIR