Home
Mutant Lines
15-0843-1

15-0843-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 23449893 [Map]; Strand: c
- AT5G57890.1 - [+] show detail - Glutamine amidotransferase type 1 family protein
  Distance: -214; Region: promoter
- AT5G57900.1 - [+] show detail - SKP1 interacting partner 1
  Distance: 0; Region: exon2 (3UTR)

TTGGAGACTC TATGACGAGA GATTTGACAT ACAAGCCATG AGAATCTGAT 
TTCTACACAC ACACTGCCAT GTTTTATAAT AAAGCTGCCC ATAGTTCTGA 
CTTGGGTCGG TTGTTTGTTA TATGTAGTGT TGTTAAAATG GACCTTAGGC 
CCACGGGTCT AAACGGGCTA TTTGTAATGT TTGAACGGGT ACCCATTTAA 
ACCCGATTAC TAACGGGTCT AAACAAATAT TAACCGAGTG GCCCATTTAT 
TTTTAAGTTT TTGGAATTTT CTATGCTAAA ACGACAACGT TACGAGTTCT 
TCAGTTTCTC AGTTCTCCAA ACGACAACTT CGAGCCAAAA CAACTACTAC 
ATTGTACAAT TCCTGTCTTC TTCAACCGAA GTATGGCTTC ACCACTCGCC 
GCCTAAACCA GTCTCTCGTT AACCCTCTTA CNAATCCAAC AAGTAAGTCT 
TCTCTGGAAG CGTTATTCGA ATCAAAAGTT TCNATTTTTA TCTCTGNGTT 
TTTGTTTCCT CTGNGATAGG AGTTTCGGTT TTGTGGAAGA GTCGTANAGA 
TGTTATTGCG AAAGCTACCA NNCCGGGCCG NNAACCACNC CNNCCCCTNN 
A

AT5G57890.1

Model type: Protein coding
Short Description: Glutamine amidotransferase type 1 family protein
Computational Description: Glutamine amidotransferase type 1 family protein; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase beta subunit 1 (TAIR:AT1G25220.1); Has 23972 Blast hits to 23972 proteins in 3394 species: Archae - 572; Bacteria - 15612; Metazoa - 646; Fungi - 629; Plants - 210; Viruses - 0; Other Eukaryotes - 6303 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57900.1

Model type: Protein coding
Short Description: SKP1 interacting partner 1
Curator Summary: F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner
Computational Description: SKP1 interacting partner 1 (SKIP1); CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G30640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR