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15-0867-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11581410 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 863; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 5106; Region: intergenic
    Flanking Genome Sequence: 15-0867-1 - 5-prime edge 
    TGTCTTTGGG TGTGTTTTGA GTTTGGGTGA ATTGTCTTCG TGTGTCTGTG 
    TTCGTGGAGT TATGTGTTGA ATTTTATTTT TTCTGTTGGT GTTTGGAGTT 
    TATTTGCATG TGATATGATT TCTATTTTGT ATCGTGTTTG AGTTTTGTGT 
    GTTTATGTTT GAATTTTGTT TTCTATGGGT GTGTTTTGAG TTTGGGTTGA 
    TTGTGTTTCA GTGTCTTTGT GTTCGTGAGA TCATTTAGTA ACCCGAACAA 
    GCCCAGCAAC ATGGGCTCGT CAAATGCAAA TAACTTGTAC GAAAGAATGC 
    ATGAGATTAG AGGGAAAGAT TTACTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11581294 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 747; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 5222; Region: intergenic
    Flanking Genome Sequence: 15-0867-1 - 3-prime edge 
    CAAAGACAAC AGAATTCAAA CACGATACAA AAAAAAGAAA ATATCACATA 
    CATGCAAAGA AACTCAAAAT ACTCTCAAAC GCAACACAAA AATAGACACA 
    AGAAAGAAAA AATAATAATT TTATGATTAA TATTTTTCTT TATTGGTAAG 
    AAGAACTTTG CGATTCTATT GCCAAGTCAA TTTTAGGTGA AGTATTCCCC 
    TTCCCATTTC TGTTTCTTGT ATTTAATCTC TTTGTTGATT CCGAAAATCA 
    CACAATGAAT TTGTTTAAAA AGGGTGAAAC AAATTCACTT TAACTCTCTT 
    GCTATTTTGT AATCAAAGAC GCAATGAAAA AGATGAATAA AACTGCTTAG 
    AGATAAAGTT AGGGTCTTTG CTCTAGAACA AGTTAGAAAA TTAGGGTTTT 
    TCGTATGATT CCTAGAATAT GCTAAACACT ATGATTCCTA GGGACAAACC 
    CCTCTATTTA TACACTATTA AGACGGTTTA AAGATATGCT AAACTTCCAC 
    TTCTTCGAGG CTTGAATCTT CTAATTTTCT TTATCTCTGA AGACTTGCTA 
    TTTCCAAAGA GGAAAACATC TTTTTCTTCA AAGTAGGAAG TCGGCTGGGC 
    GATCTCCCTA CTTCGGGTTA AGGTCGTCGG GCGACCTCCT TATTTTGGCC 
    CATTACAGGC TAAACCGGGA TACCCCGGTT TGACTAAAAT CTCAGTTAAT 
    TCGNAATTNT TCTAGTTTAA GTCGGGN

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR