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15-0874-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10932084 [Map]; Strand: c
      • AT4G20235.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 28
        Distance: -807; Region: promoter
      • AT4G20240.1 - [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 27
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-0874-1 - 5-prime edge
    CTTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA TTGTTCAGAC TACCAAGTGA AAATGTCCAA
    TTAAAGGGAT ATGACATTTC TGCTGGGACA CATGTAAATG GGTTTTTTTT
    TTTNTTTTTT AAAATNCTNA NAAAANAAAC CCNAANNGNA AAAANGNNCT
    TNNACTNGNA NCNCAGGNNA NAANNAANGC TGGGNCCCNC NANCAAANCC
    CTGCAANNNG GGGGCTNGAN CCCNANAAAN NTAACCCGGA ANGGCNTTTN
    GGNCCAAATT NGNNTTTNAN CGGNCCNGNT NCNAAATNCN TCCCNTTNGN
    ACCNGGGAAA AAACTTNNCC CNGNAANCGN ATTTTTTTNG GTTTNGCCCA
    ANTGGNCCCT ACCCACCCTN GGAAAANGGT NNANCNGGAA ACNNAGGGNN
    GGCCCNTTGG GAAANNANAA CCCNGATNTA CCNNAACCNT NGGGTNTNGA
    NGTTGGCCGA AAGTTCCCNN NNNTGGCNTT NCCANNANTG GCCCCCNCCC
    TTNGNNNAAA AAANAAAAAN NGNGNCCATT NNCCCNGTNN AAAAANNANN
    NTNGNGGGGG NCCTTNGTTT AAGGGTCCCN NTAAANNAAA ATTGNANNNN
    GGGGGGNAAC ANAAANCCGG GGGTCTNTTN ANANAAAAAA AANCCTANGN
    GGGCCTTGTA NGGGNANNNG ANGGAATNGG GGNGGGTTNN CATTTGNAAC
    NAAAGGNCCC

AT4G20235.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily A, polypeptide 28
Computational Description
"cytochrome P450, family 71, subfamily A, polypeptide 28" (CYP71A28); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 14 (TAIR:AT5G24960.1); Has 11933 Blast hits to 8219 proteins in 526 species: Archae - 4; Bacteria - 111; Metazoa - 1259; Fungi - 469; Plants - 10011; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20240.1

Model type
Protein coding
Short Description
cytochrome P450, family 71, subfamily A, polypeptide 27
Curator Summary
putative cytochrome P450
Computational Description
"cytochrome P450, family 71, subfamily A, polypeptide 27" (CYP71A27); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 20 (TAIR:AT4G13310.1); Has 27160 Blast hits to 26983 proteins in 1467 species: Archae - 44; Bacteria - 2315; Metazoa - 10770; Fungi - 4604; Plants - 8614; Viruses - 3; Other Eukaryotes - 810 (source: NCBI BLink).
Link
InterPro Scan - TAIR