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Mutant Lines
15-0886-1

15-0886-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 2774857 [Map]; Strand: w
- AT5G08560.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: -185; Region: promoter
- AT5G08560.2 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: -253; Region: promoter

CTTAAAATAC GTTAAAACGG TGTCGAATCA GCAGATCAAA CGGAACAAGC 
GGAATAAATA TAAGTTTTCG TTTATAGAAA ACTAGTTTTG AAATGATTGT 
AGATAAACAA AACAGAAAAA AGTTAATTTC AATGATATCG GTAATGCTAT 
TCTTCGAGGA TTATTTGGTT GTGTTCAACA AGTAATTTAA TCATATATAT 
AGGCGGACTA GAGAAAGGAA TGCTTTGAAA ACAAATATTT GGTGCGGAAG 
GTATGTGATT TGGCAGAATT GTCTTGTGTT TTTAGATTGT GTTCAAATCT 
TATGTAACAT AGGCCGCCTT TATACATCAA TACGATGCCA AAGAAATGTC 
AAAGCAAATA ATATATAGAA ATCCAACTAA AAGCT

3 prime edge [+] show sequence

Chromosome: 5; Position: 2774741 [Map]; Strand: w
- AT5G08560.1 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: -69; Region: promoter
- AT5G08560.2 - [+] show detail - transducin family protein / WD-40 repeat family protein
  Distance: -137; Region: promoter

ATTTTAAGTA AGTATCAGAA ATATTAATGT GAAGATAAAA GAAAATAGAG 
TAAATGTAAA GGAAAATGCA TAAGATTTTG TTGGGACTAT ATATTAGATC 
GAGAGTAGCC TGTGATCAGC CACGCCTCTG CCCTTTGCTT CTTCTATTGC 
CTTCTTTTAT AATATTTGTT TTGCCTTTCT TATTGAGTCT CTCTCTCCTT 
TTCATCTTCT TTAACGCTTC TCTTTTCCAG AACTTGCTCT CTCTCTCTCT 
CTCTATCATC TCCTCACCGC TTCCTAAATC TCTATAGCGG TCTTCCTTCC 
CTCCTTTGTT NCCGGGCTGT NCCTTAATCA CTATCTCTTT CTCTTTCTTC 
TGCCATCGCC AAACCTTATC TGGGTTTTGC TTCTTATTNG GTAAGANTGG 
ATTTTTCTCC CTTTNGATTN TGNCCTTCTT AGATCGTGTT AATTGATCTT 
CATCCCCAAG NGATCCTTCT TCTATTTAAG TNTGATGATG ATTTTGACGA 
TNTGTTTTTT NTGCACTGCT AATCTTATTN GGGGATC

AT5G08560.1

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G08560.2

Model type: Protein coding
Short Description: transducin family protein / WD-40 repeat family protein
Computational Description: transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G43920.1); Has 58921 Blast hits to 28907 proteins in 822 species: Archae - 84; Bacteria - 8409; Metazoa - 23216; Fungi - 12597; Plants - 7341; Viruses - 6; Other Eukaryotes - 7268 (source: NCBI BLink).
Link: InterPro Scan - TAIR