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15-0919-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138477 [Map]; Strand: w
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -671; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -671; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -674; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -854; Region: promoter
    Flanking Genome Sequence: 15-0919-1 - 5-prime edge
    GTATTTAGTA ACACTTATAT GAGATTATAA GGAGTTTTTT GATAAGTGAA 
    ATGAATGAAT TTTCACATAT TATTGAGCAC CTGACTCTGC ATTCTGCAAT
    AGGCGGCTAG TTTTTATCAG CCACATAAGT AGTCTTTTAT TATTTGAAGA
    TATGCACATG ACCAACACAT TATAGTGTTC TTTTTGCCTG GCTTCGATAG
    GTCCACAAAT AATGGGTTTG ATAGAAAACA ATTCTTGCAT AATGTGGGGG
    ATTCGCCTAG CTAGACATGA AGCATTTTTT TGGAGTATAT AAATGGGGAT
    TTTAGCAATA CTATGATTAG TATTTGGATT ATGTAATCTG TGATACTTAA
    ACACATTGCC TGCATATAAA TCCCTATATT ATTTAAAATA TATCATTTTT
    TATTTTTGAC AGAAATCATA GAGATTACGG AAACAGATAA AAGCACGCTC
    CAGAAAATTA GAGACAAATA TTACTATTCA AAAAGATTCA GATCGCTACT
    AAGTGAGGGT CGCCAAATCG CGAGTCGAAA CACCGATTTT GAGTCCGCGA
    AATTCGGAAA TTTGCGTGGT TGCCACAATA CCGAAGTACT GGAATCCTCA
    TCGNGAATGG AATCTCTATA TGTATGTTTC AGTGTANTAA ATTTCAGGGC
    TTAGCATTNG CTTTCTANAT TTGNATGTCT AAAANAAN
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138361 [Map]; Strand: w
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -555; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -555; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -558; Region: promoter
      • AT2G01270.1 - [+] show detail - quiescin-sulfhydryl oxidase 2
        Distance: -970; Region: promoter
    Flanking Genome Sequence: 15-0919-1 - 3-prime edge
    CTAAATACAT GAATATATAT GTTCTGATAC GTTTATGTCA TTGTCAATGA 
    ATGATGAATG TAGTTGGTGT ACATGCATTA GTCGAATCTT CAATGGTAGT
    ATAGTTTTTG ATTACTCTTG AACATTGTGA AGCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01270.1

Model type
Protein coding
Short Description
quiescin-sulfhydryl oxidase 2
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
Computational Description
quiescin-sulfhydryl oxidase 2 (QSOX2); FUNCTIONS IN: thiol oxidase activity; INVOLVED IN: oxidation reduction, cell redox homeostasis; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Erv1/Alr (InterPro:IPR006863), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), ERV/ALR sulphydryl oxidase (InterPro:IPR017905), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: quiescin-sulfhydryl oxidase 1 (TAIR:AT1G15020.1); Has 2833 Blast hits to 2194 proteins in 312 species: Archae - 22; Bacteria - 32; Metazoa - 1533; Fungi - 396; Plants - 476; Viruses - 0; Other Eukaryotes - 374 (source: NCBI BLink).
Link
InterPro Scan - TAIR