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Mutant Lines
15-0960-1

15-0960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 5497731 [Map]; Strand: w
- AT5G16730.1 - [+] show detail - Plant protein of unknown function (DUF827)
  Distance: 0; Region: exon1 (5UTR)

CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCAT TCTCCGTTAC TTCGATCCCA CCGATTCGAA 
TCATTCTCTC TCTCTTTCTT GATCTGAAAA TNGAGNCCCA ATNCCAGCAN 
ANCTTATCAA TCGAATTTCT GATCAACTGA GCGCGACNGG TGGTGGCGAC 
NGGTGGTGGC GACNGGTGAC AGCGATCGAC GGTTATGGCT TCGAAGACTA 
AGTAAGACTC TTTACTCAGT TTCACTCTGT TTTAGTTTTA TCCTATTTTC 
TCTGGGAAAT TTTTTAGTAG ATCGTAGTAG ATCTGATCCA AGTTACTATT 
TTGAGAAATT GTCAATGATC GAGTTTTGGA TCTACTAAAT TCATTTCTAC 
ATTTGTTTTG TCCTAATTTT TTGCGGCAAT TTATTTCTTT GTTCTGAGAT 
CGACTGTTGT TATTGTCTTT TGTTGGAAAC AGAACTAGTT TGTCCGAAAC 
AACAACTACT ACTACTCCTA CCGGGAAATC ATCTCCAGCA ACTCCAAGAA 
TAGCAAAAAG AACAGTTAAT AAATCCGAAA CTAGTAATAA TAATTCTCCA 
TCTACTACTA CTCCACATTC ACGTCTTTCT CTTGATCGTT CTTCTCCAAA 
TTCCAAATCT TCTGTTGAGA GACGATCACC AAAGCT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 5497727 [Map]; Strand: w
  - AT5G16730.1 - [+] show detail - Plant protein of unknown function (DUF827)
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 15-0960-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATCATATAGA TAATGGCAGG TGTGGTTGTC TCCAGAGTGG CCTCACTAAC 
TCGTTAAAAA GAAGCT
```

AT5G16730.1

Model type: Protein coding
Short Description: Plant protein of unknown function (DUF827)
Computational Description: LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545), Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT3G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR