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15-0972-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 164872 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-0972-1 - 5-prime edge 
    CTNGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA TGCAAAATTT GACCACAAAA AAGTTCCTAT 
    AAAAAGTGAA AAATTTTCAA TATTATTAAA GTCAAGACTA GCTAAATGCC 
    ACTCTAATGT AATTAAAATA TTTTTGCTTA TTTACTTTGT ACGAAAAAAA 
    CAAACAAATG GAGGAGAAAA ATATAAGGAA CTCACCAAAC GGGATTTGAC 
    TCCTCTTGTG GCGGTGGTGG TGGCGGTGGC GGTGGCCGTG GTGGCGGGCT 
    CATCCTGTCG TGTGTTCTGA TATGCCTCCT CTTGCCTCTG TTTGGCCATA 
    AAGAGAGCAG CGATCTTCTG CGTAGCTTCG GCTTCGGTGG CTCCTTCTTT 
    AACGAGCTTT TCAAGCTCAG CTTTGGGAAT CCTCACCTTC ACCCTCCTCA 
    CCGCTCCTTC TTCTTCCTCC GTCGTCCATC CTCCTGGTGG TTTGAGTATG 
    GAGAGATCGG AAGACGATCT CCGGGCCAGC ATGAGACTCT CAAGCCTCTC 
    CTTTGCACTC ACGTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 164923 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-0972-1 - 3-prime edge 
    AATTGCTAAC ACTTTTATAT TGTTTCAAAG ATATAGGACA AAATTTATTA 
    CACAACTTTT GATTTTGTCT TTCAAATAAT CATTTAAAAG TTTCATTCTA 
    CAACAACAAT GGTATTGATA TGTTTAGTAA TGATGTTGCA GAAACGAGTG 
    AGTTTCATGG CGGAAAGAGG AGGGAGCGAG ATCACCTGTA GCTTGAACCA 
    ATAAACATAT GTATTAGAGA ATGCTTCCCA ACGTTTCTGC AAATTCTATG 
    TACATAAAAA ACGCAGAAAG TTTGAGAGAA AGCT

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR