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15-0974-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8979313 [Map]; Strand: w
      • AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
        Distance: 1220; Region: intergenic
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: 2364; Region: intergenic
    Flanking Genome Sequence: 15-0974-1 - 5-prime edge 
    CTGGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC ATCACCTATT TATTTATGAA GAAGATATGT 
    TTTGATATTA GATATTTTTT GGTTTAAATT TGAATCTTTT CTTCCAAAAT 
    GTAGACAAGA TTGTCAGCCT TTCCCTTAGT AAACCAAGCA AATTGCNGAC 
    AAAAATAATA GCATAAACTT TGTTTATTCG TATCTTATAC TTTTTTTTGG 
    TGTGTATTCG TATCTTATAC TAGTCACTAG GGATTTTGTC CCAAAATAAA 
    ATAAAATAAA AATACTAGTC ACTAGGGCGA GTCAATGGAT TCTAAATTAC 
    GTTAATGCAT TCATCTTTTG CTCTTANACT TTGCTGAGAT GTGGCATATC 
    ATTATTCATT AGCTTGGGAT TCTAGTCTAT TTAATTAGTT ATACGATGTC 
    TGTCATAGTC TAGGTCAATT ATGATGGATT CGGTTCCTTT GATTTANAAT 
    TAACTTATCT AAAATTATTT AGTCAGGTTA ACGTCAAATG TAAAAGTTAC 
    TATTGAAAAA TGGCAAAAAT AGCNAAAAAA AACTTNNCCG ATTTTTTTAT 
    ACCGANAGCN NGCNTTTTGC TAAAAAAACN AANNGGGNNN GAATAANNAA 
    NCCGGGGGGG NGANNANNCC NGGCCCNNNN GGNGG

AT1G25550.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1641 Blast hits to 1637 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1615; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR