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15-0977-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8156839 [Map]; Strand: c
      • AT1G23030.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0977-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAT 
    TTGCGCAGAT CTCACTCGAC GAGTTTGTCT CTTAACGCAT TTGTTAGAGG 
    AGATTAGAGA CTCAACTCCT ATCGATTCCG CCGCTTCGTC GTCGTCGGAG 
    AATGATTGGT GGTCTGATCT CGTGGTCGGA CTTCAAGCCG CGAAGCGTCT 
    TCTCTCCACA GCTCGATTCC AAGCTCGCGA TTCCTCTGTA AGCAAAAAAA 
    TCTAACTAAC TCCTTAAAAA AAATCAAATC ACGATTTGTT GTTCTTCAAT 
    CTCATGAAAA TTCCCAGATT CATTAGAATT ACCGGTTAAA TGTAATTAGA 
    CCATTGGTTA CAATACGGTT ATCTCCGATT TAGCTGAAAG ATTTTGAATT 
    TTGTTGATTA AAGGATGGTG CTGCGAAGAG AATCTCATTT CAGTTCCAAT 
    GTGTTACATG GAAGCT

AT1G23030.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71020.1); Has 7493 Blast hits to 5002 proteins in 288 species: Archae - 0; Bacteria - 26; Metazoa - 2087; Fungi - 726; Plants - 3867; Viruses - 3; Other Eukaryotes - 784 (source: NCBI BLink).
Link
InterPro Scan - TAIR