1. Home
  2. Mutant Lines
  3. 15-0995-1

15-0995-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10134607 [Map]; Strand: c
      • AT1G29030.1 - [+] show detail - Apoptosis inhibitory protein 5 (API5)
        Distance: -646; Region: promoter
      • AT1G29040.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: 0; Region: intron2 (CDS)
      • AT1G29040.2 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: 0; Region: intron2 (CDS)
      • AT1G29040.3 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: 0; Region: exon2 (CDS)
      • AT1G29040.4 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein C...
        Distance: 0; Region: intron2 (CDS)
      • AT1G29041.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -844; Region: promoter
    Flanking Genome Sequence: 15-0995-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCGC CGCAGATGAT GATATTCAAT TTGGTACCCC 
    TCCTAAAAGC AGGAATCGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10580915 [Map]; Strand: c
      • AT1G30110.2 - [+] show detail - nudix hydrolase homolog 25
        Distance: -820; Region: promoter
    Flanking Genome Sequence: 15-0995-1 - 3-prime edge 
    TTNNNNNAAT NAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCACTT 
    AAAATTGGAT TCAACATGAT TATCCACATA TTTCTTTGTA GGAATAACCA 
    ACGGAAAAGC T

AT1G29030.1

Model type
Protein coding
Short Description
Apoptosis inhibitory protein 5 (API5)
Computational Description
Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT2G34040.1); Has 834 Blast hits to 647 proteins in 164 species: Archae - 2; Bacteria - 50; Metazoa - 244; Fungi - 88; Plants - 132; Viruses - 7; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.2

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 190 Blast hits to 190 proteins in 92 species: Archae - 2; Bacteria - 141; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.3

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.4

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29041.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G30110.2

Model type
Protein coding
Short Description
nudix hydrolase homolog 25
Computational Description
nudix hydrolase homolog 25 (NUDX25); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 26 (TAIR:AT3G10620.1).
Link
InterPro Scan - TAIR