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15-1008-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 560404 [Map]; Strand: w
      • AT4G01350.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1008-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCN GGNNGNGACT GTGATGGCCT GCCATGTGAN 
    TGGNNTACNT GTGCANNGGN TACTTTTCGC AATGAACCTT NCTGCTTTAT 
    TTGGTTCCAC AAAGAGTGTG CTGAGGCCCC AGCGGGAGAT CAGCCATAGT 
    TCCCACCATC AACATCCTCT CCTGCTCACC AATGACTCGA ATGATGGCCG 
    TCCTTGTGAT CTGTGTGGAC AGAAGCTATT GCCTCCTTGT TACAGTTGTT 
    CCACATGTGA GTTCAAGGTG GATTTGACTT GTGCGATGAA ACCATCACCG 
    CCTGCTATCG AACATCCGCT GTGTCATCAC CATTCACTTG TCTTCTTGAA 
    GAAACGAGAG GAGAAGGTGT CATGTGAATT GTGCAAGGAT TCTATTGCCG 
    GACCATCCTA TTCGTGTCTT GAATGCGATG TGTACTTCCA CGTGAATTGC 
    ATCCAGCTCT CCCAAAGAGG TAAATNATCC TTGTCATTCT GCTCATTCTC 
    TCAAGGTAAT CCCATCTGAG TCAATTACGG ATGATGCCCN AGACAACTTT 
    GTCTTTTATT GTGGNAGAAT ATACCCAGCC TGAAAAANAT GCCTTTNTNA 
    TTGGNTCNGT TTGNAATTTN CAAAATCGNG CCTTGGGTTG TTCCAAAAAA 
    CCNACCACTC CNTGNTNNTN GAACANNTNN AGGACCCCNA AACCCNCNCT 
    TTTTTTCTTT TCNNAAAAAA AANCCG

AT4G01350.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR