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15-1038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • torsioned (PATO:0002445)
    (Leaves::twisted petiole)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13584212 [Map]; Strand: c
      • AT4G27060.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1038-1 - 5-prime edge 
    GNGNNCGCAA CANGGCCGCN TGANNNTTCT GGGTANCACT TGCGNANGAT 
    GTTCAAGGNN NANTNNGANA NTCTCTCNGT NAAGNGTCNN TAGAANGAAN 
    GGGATTACAT ATGACGCATN NNNGTATCNT AGANANTGAN AGGGGANGAA 
    ATNNTANNTC TNTATCTGCT TCTGGATCTG ANGAGCGTTC CTTGTANATG 
    AGNCTATANC TGNGAAGANA GAATGAGAGT TACAGAGATN NGGAACATGC 
    CTTGANGTGG GANCCAGGTG CACCNGACAG CGNCGNAGNC ACNGNGANAG 
    GGCATACAGG ATTGNCTTAA AAGTGATGAT CTGGGTGACN AGATAAANCT 
    NCNGATGAGA CCCTGNNTNC TTTGNNTTCA CATANNANCG NAATNATNNA 
    GGANNANACC NNNTGNNCCA TTACCNCGCT TGAANACCTG CCGGTTTGAC 
    AAGGNAGCTA TCTTCTCTTT CTCTAATTAA TCTAATTCCA CTATTATCGN 
    GTTTGANACA CGTCATTTTT TACAAGGGAG CTACATTTTT CTAGTAATCT 
    AAAGNGGNCC TGTNNNGAAN NAAACGTAAN CCCNTAANCN NTNNATTCCT 
    TGNAAATGNN NTNANCNNCT NAAACATNTN NGNNANNGGN NGANANNGCT 
    TTNGGACCTT NNNCNNNTNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13584312 [Map]; Strand: c
      • AT4G27060.1 - [+] show detail - ARM repeat superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1038-1 - 3-prime edge 
    ACTGACACTG ATATTCAAAA TTCACCATAT TCTTCCATTT GCTGTCTATA 
    GCATGACAAG GAGGAGATTA TAAGGATTCT GGGCAAACCT GAGAGAGACT 
    TGAAACAACC TGGCAAAAGG GAAGCCTTAG CAAGGAAACT GGAATTGCTC 
    AATAGCTTGC AAATTCTAGG GCAAAGCT

AT4G27060.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Curator Summary
Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.
Computational Description
TORTIFOLIA 1 (TOR1); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G50890.1); Has 232 Blast hits to 225 proteins in 36 species: Archae - 2; Bacteria - 8; Metazoa - 6; Fungi - 6; Plants - 191; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR