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15-1041-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30189881 [Map]; Strand: c
      • AT1G80290.2 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
        Distance: 307; Region: intergenic
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: -1975; Region: intergenic
    Flanking Genome Sequence: 15-1041-1 - 5-prime edge 
    GTGAGTAACG CCCACACGCT ACAAATTTAC CATTTCGAAA AAGACTAATA 
    CATACATCTC TTTTTATGTT ATTGGCTAAT GTCTTCAACT TTTGTCCAAA 
    AAAAGAAAGG CTAATGTTTT CAACTAACAA TTATTTGTGG TTTAGGTAAT 
    GCTATGTGTA TATTAAAAAA ACAAAATCCT AGTTATTTAC AAATACATGT 
    AAAACTTAAG ATTTTCATAA TTTGAGATAT TTGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30189997 [Map]; Strand: c
      • AT1G80290.2 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
        Distance: 423; Region: intergenic
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: -1859; Region: intergenic
    Flanking Genome Sequence: 15-1041-1 - 3-prime edge 
    TTACTCACTA TGTGATCATT TTTGTATACA AGGAAACAGG AAGCT

AT1G80290.2

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferases superfamily protein
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 640 Blast hits to 640 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 8; Plants - 102; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80300.1

Model type
Protein coding
Short Description
nucleotide transporter 1
Computational Description
nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR