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15-1084-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9862280 [Map]; Strand: w
      • AT1G28220.1 - [+] show detail - purine permease 3
        Distance: -846; Region: promoter
      • AT1G28230.1 - [+] show detail - purine permease 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-1084-1 - 5-prime edge 
    ATAATCACTA ACTGGAAGAA TAGGCAGTTC TGTCTCCGGC GGTTGAGGTT 
    TATCAACAAC TTTCTTGCCG GATTTAAACT CGCCGTAGAA GTAAGAGACA 
    AATCCCCAAA GAGAAAGAAG TAGAGAGACA CCTTTCTCTG CCTGAAACTT 
    CTCCCGGAAA CAAACGACGG CGAAAACTTC AGTCACCGGA AGCAGAACAC 
    TTATCAGAAC ACCAGAAGCT AGTGATGACG CACAAAACAC AATCCCTATG 
    GCTCCTAAGA AGAAACCTTG CCATATTATT CCTGTGATCA CTATCAATGC 
    ATAGTAAAAC ACTGATCCTC CAATCTTGAA CTCTCTTGCT TCTCTTGCTA 
    TCACCTACAA AACATGTATG ATGATGATTT TAGTTGATTC TCAAGTTTAA 
    TCATAATTTT AAATAGATAT GGAAATACAG GATAAAGGTT TGAACAATTT 
    TTAAATAATG TTTCTAATAA AAGATAAGGA AGACAAATCA TATATATGAA 
    AGTTGGTCAA CTCTCTCCAT ATGATTGACA CATCATCACT TTAACATGTG 
    TCATGTGTCC ACATAATAAT TAATGNAGCT NCCANCCGGG NCGNNNACCA 
    CCCNGCCCCN NNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11582172 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 1625; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 4344; Region: intergenic
    Flanking Genome Sequence: 15-1084-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTG 
    TCACCTGATT GCTGAATCAT TTACCAATCA GATTGATTAT GTTAGAGCTC 
    GGAAATGGAG ACAATAAACA TATAAAGATA TAAAGATAGC GAAATAAACA 
    AAGTGGTATG TATAAGTATA GATTCTTCTT GCATGACTTT CTTCTTCACA 
    GATACAACGA AAGTGAC

AT1G28220.1

Model type
Protein coding
Short Description
purine permease 3
Curator Summary
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
Computational Description
purine permease 3 (PUP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 2 (TAIR:AT2G33750.2); Has 782 Blast hits to 771 proteins in 171 species: Archae - 1; Bacteria - 157; Metazoa - 97; Fungi - 2; Plants - 399; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28230.1

Model type
Protein coding
Short Description
purine permease 1
Curator Summary
Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.
Computational Description
purine permease 1 (PUP1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 3 (TAIR:AT1G28220.1); Has 617 Blast hits to 607 proteins in 89 species: Archae - 4; Bacteria - 97; Metazoa - 10; Fungi - 14; Plants - 377; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR