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15-1127-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21121906 [Map]; Strand: c
      • AT3G57060.1 - [+] show detail - binding
        Distance: -855; Region: promoter
      • AT3G57060.2 - [+] show detail - binding
        Distance: -793; Region: promoter
      • AT3G57062.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (3UTR)
    Flanking Genome Sequence: 15-1127-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAT 
    GATGCTTGTT AATGGCCCAT GAACAAAAAT CGAGATTTCT CAACTCCAAT 
    TTGGTTGTAT TTGTTCTGAT CAGCAACTCT GGGATGCATA TAATGCTCGT 
    TTCCTTTTGC TCAGCTGCTT GAGTTTATCT CTCATAGTAG CNTGGTTTTT 
    GTGTCGATAC AAGTATCCTC AGGATCATTC ACATGCTCAG ATAATTTATC 
    TCCTCTCTAC ATAAGTACAT CAGCATTGAT GATATGATCC ATATGCTTAA 
    GTGATTGTCT GGAAAACAGT TCATAGGTGA TAATACCTTC TTAGCTTCAG 
    TACCAAAACA TTCCTGGAAG CATGTTTTAT AATCCTGAAG ATTACCTTTT 
    GTTTTAGTTT TTCTCCTTAG CTTACTAGTC ATTGTTTTGC ATTCAGGCCT 
    TTCTGAATT

AT3G57060.1

Model type
Protein coding
Short Description
binding
Computational Description
binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1); Has 13948 Blast hits to 8962 proteins in 742 species: Archae - 66; Bacteria - 1309; Metazoa - 5536; Fungi - 1705; Plants - 572; Viruses - 208; Other Eukaryotes - 4552 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57060.2

Model type
Protein coding
Short Description
binding
Computational Description
binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1).
Link
InterPro Scan - TAIR

AT3G57062.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system.
Link
InterPro Scan - TAIR