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Mutant Lines
15-1159-1

15-1159-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 9645815 [Map]; Strand: w
- AT2G22680.1 - [+] show detail - Zinc finger (C3HC4-type RING finger) family protein
  Distance: 0; Region: exon1 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAGC AACAAATGTG GAATCTGTTT ACAGAGTGTG 
AAATCAGGTC AAGGTACGGC GATTTTCACG GCGGAGTGTT CTCACACGTT 
TCATTTTCCT TGCGTAACCT CACGCGCCGC CGCGAATCAT AACCGTCTTG 
CTTCTTGTCC GGTTTGCGGA TC

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 9645764 [Map]; Strand: w
  - AT2G22680.1 - [+] show detail - Zinc finger (C3HC4-type RING finger) family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 15-1159-1 - 3-prime edge
```
GATGCTGCTA CTCTGCTTGA ATCGGAGTTT GGATTTGAGG AGAGTGAAGC 
TCGCCGGAGA AATAGGAGAA GAAGAAGGTG TTAAAAGAGA GACAAGGCTT 
CTGTTTCTCG GAGTTGTTTC TCCGGTGGTG GTGGTTTTGC ACNTTAAGCT
```

AT2G22680.1

Model type: Protein coding
Short Description: Zinc finger (C3HC4-type RING finger) family protein
Computational Description: Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT4G37890.2); Has 1023 Blast hits to 1022 proteins in 225 species: Archae - 2; Bacteria - 267; Metazoa - 133; Fungi - 122; Plants - 361; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link: InterPro Scan - TAIR