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Mutant Lines
15-1180-1

15-1180-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 10832262 [Map]; Strand: w
- AT4G19985.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
  Distance: -168; Region: promoter
- AT4G19990.2 - [+] show detail - FAR1-related sequence 1
  Distance: -41; Region: promoter
- AT4G19990.1 - [+] show detail - FAR1-related sequence 1
  Distance: -586; Region: promoter

CTTGGAAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
TTCCCATCCT ACTTTCATCT ATAATAACCG CGAGTATAAA AAAGCGAGTA 
CGACGGCGAG GACGAAGACT CTTTGCCCAA AGATCTGACT CTGTACTCGC 
TTCCGGTCGT TTCTCATCTT CCCAAGTCTT CTTCATCATG TAATAAATCT 
TTCCTTTTTT GCCCTCCCAA TTATATCATC TTTGCACCTT TAGTTAATTA 
GTTTCTGATT TTGTCTATTT CATACTGTAA TTCTGTAAAT AGTCTCTCGA 
TCTTCATTTT GAGTTTGCTT AAATATCATT TCTGGGTTTT TGCTTTGGTT 
CCTAAATTTG TTTCTATTTT AAGTGATGAA GATTGGAGCT GACTTTGTTG 
GTTTTGAATG GTTGACTTAT CATGTTAAAG ATGATTCATT TATGTATTTG 
AAGNTGTTTT TGCTTACATT TTGAGGGGNT TAGNATTCTG ATTTTGCNGN 
NNATAAGTTN ATNTGGNNCN CTTGNTACNC AAATTTNTGN TTTTNNNAAA 
NTTTGCNANC NGGAAACTGG GAATANNGGN NNNNACNGGG NGTATTTTGA 
NGANAAAAAA NNNNNTANCN GGGGGGGNGN NNNNNNNGCC NNNNGNA

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 10832219 [Map]; Strand: w
  - AT4G19985.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
    Distance: -125; Region: promoter
  - AT4G19990.2 - [+] show detail - FAR1-related sequence 1
    Distance: -84; Region: promoter
  - AT4G19990.1 - [+] show detail - FAR1-related sequence 1
    Distance: -629; Region: promoter
Flanking Genome Sequence: 15-1180-1 - 3-prime edge
```
GCGGTTATGT TGGTTTCTTC TTCTCTCCTC TTCCTCCGGT TATCGTTGCT 
TAAACCTGTT TTTATTTTCG ATAACCGGAT C
```

AT4G19985.1

Model type: Protein coding
Short Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: N-terminal protein myristoylation, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: nuclear shuttle interacting (TAIR:AT1G32070.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G19990.1

Model type: Protein coding
Short Description: FAR1-related sequence 1
Computational Description: FAR1-related sequence 1 (FRS1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 1641 Blast hits to 1185 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 8; Plants - 1612; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G19990.2

Model type: Protein coding
Short Description: FAR1-related sequence 1
Computational Description: FAR1-related sequence 1 (FRS1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FRS (FAR1 Related Sequences) transcription factor family (TAIR:AT4G15090.1).
Link: InterPro Scan - TAIR