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15-1214-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9170094 [Map]; Strand: c
      • AT1G26540.1 - [+] show detail - Agenet domain-containing protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1214-1 - 3-prime edge 
    NTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    AAGAAAGCAA CAAAATTTTG ACAGCTACAA GCAAAAACAA CACCGGATTT 
    AAGAAAGGAT CTCTTAACCA TGGAACTATA ACACTCAACA AACGAAAAAT 
    AGAGAAAAGT TTCAGCCTTT TGAAACTAAA GCTGAAACCT TTAACCATAA 
    CACGCAACCA GACTCAAAAC GGATTAAAGC T

AT1G26540.1

Model type
Protein coding
Short Description
Agenet domain-containing protein
Computational Description
Agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1); Has 924 Blast hits to 776 proteins in 124 species: Archae - 0; Bacteria - 33; Metazoa - 257; Fungi - 37; Plants - 429; Viruses - 3; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR