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Mutant Lines
15-1261-1

15-1261-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 21644501 [Map]; Strand: w
  - AT5G53340.1 - [+] show detail - Galactosyltransferase family protein
    Distance: -939; Region: promoter
  - AT5G53350.1 - [+] show detail - CLP protease regulatory subunit X
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 15-1261-1 - 5-prime edge
```
GTGGTGGTGG TGGTGGNGGA AGTAGTCCTG GTGGTCCTGG TAACGGAACA 
GGGTCNAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 21644385 [Map]; Strand: w
- AT5G53340.1 - [+] show detail - Galactosyltransferase family protein
  Distance: -823; Region: promoter
- AT5G53340.2 - [+] show detail - Galactosyltransferase family protein
  Distance: -900; Region: promoter
- AT5G53350.1 - [+] show detail - CLP protease regulatory subunit X
  Distance: 0; Region: exon1 (CDS)

ACCACCACGA CCGAGATTAA CACTGGACCC ATTAACCCTA ACGGAAACTC 
CATCACCAGG AGGCTGCCAT AGATCCGGTG GGTCTCCTTG TGAGCTCAGA 
ATAACAACAG AAGAACCAAC ACCGCTGAGC TTCTTCTGAG CAGCATAACA 
CTTAGTCGAA TTACGTCTCT CTCCTCCTCC TCGATTATCC AAGAAACTCG 
TTCCAAGAGA GGAAATTTTA TAGGGGAATT TCTCATCGGA TTTAGAACGG 
TGATTACAGT GAGGAGGACT TGTGGCGGTT CGAGCGGTGT GGATACGGTT 
GAAGATAAAG TATCTAAAAT GAGAAAGTGT AAGAGAAGCG GTTTCTCTTG 
ACGTATTCGA CCTTAAAGCT GCGGCCATGG CGGATTGCGA AGAAGTAGAA 
GAAAAAGCTC TTAGCAATTG ATTAACATAA TCCGATCGAG GATTTGGTTT 
GATGGGTTAT GTAAGAAAGT GAATAAAAAC TGAAACTTTG CGTAAAGGAT 
TTGAATTGAT GACGCAAATT CTCTCGAGAG AGAGATGAAG TTGTGAAGCA 
CACGAAAAGG ATGATGAAAT GCAAAAATTC GAAAGGGGAA AAATGGAAGA 
GAGAATATCT AATCAATAAT CATCTGGTAA GAGTTTGACG AGAGTATTTG 
ACGGCCCATG GTTTTTTAAA CGTCGTCGTC TTGACCTCCT NCTNCTTTTC 
AACCGNCGGG TAACAAAAAA

AT5G53340.1

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G53340.2

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G32120.1); Has 782 Blast hits to 773 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 225; Fungi - 0; Plants - 529; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G53350.1

Model type: Protein coding
Short Description: CLP protease regulatory subunit X
Curator Summary: CLP protease regulatory subunit CLPX mRNA, nuclear gene
Computational Description: CLP protease regulatory subunit X (CLPX); FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR