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15-1264-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8849449 [Map]; Strand: c
      • AT2G20560.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1264-1 - 5-prime edge 
    GTTGCATATG GTAGCTGCGT CCTCTGTATT TTCATAAAAT ATCTTCGAAG 
    TTGTGGATTG ATTGTTAGGA TTACTTGTCT CTATTGGGTA CACGTATTTG 
    TGATTTTGAG TCTTTGTTCC TGTTTACTTG ATTCTCTGGA TGCTTACAGG 
    TACTAAGTGA TCCTCAGAAG AAAGCTGTGT ATGATCAATA TNGTGAGGAA 
    GGTTTGAAAG GGAACGTGCC ACCTCCGGAT GCAGGTGGAG CTACTTACTT 
    CTCTACCGGG GATGGTCCAA CGTCCTTCAG GTTCAACCCG AGAAATGCGG 
    ATGATATATT TGCTGAGTTC TTTGGCTTCT CTAGCCCATT TGGCGGCGGA 
    AGAGGTGGTA CAAGATTCTC TAGCAGCATG TTTGGTGATA ATATGTTTGC 
    TTCTTTCGGC GAAGGAGGAG GCGGTGGTGG TGGCTCGATG CATCACGGTG 
    GAGCTAGGAA GGCTGCTCCT ATCGAAAACA AGTTGCCTTG TAGCCTTGAA 
    GATCTTTACA AAGGAACCAC CAAAAAGATG AGGATTTCTA GGGAGATTGC 
    TGATGTCAGT GGGTAAGTGA TCATCAAACC TAATGGAACC CTATACGTTA 
    GCTTGGCTAT TCAGTTAANA AACCGTTGGT TTGGGTGTTT CTTTGGTATT 
    CATANTGAAA GCANAATGTT GATCCTANTT CNGAACCCTT GTTTANGGGG 
    GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8849565 [Map]; Strand: c
      • AT2G20560.1 - [+] show detail - DNAJ heat shock family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-1264-1 - 3-prime edge 
    TATGCAACAG CACGAAATAA CTAAAGACTA TAACAGAATC TACTTAAGAC 
    AATAAGTTGA ATTTCTCAAA AGCCCTCTAG CAACAAGATT CATAAAGATG 
    AATCTTTTGT TGGAATT

AT2G20560.1

Model type
Protein coding
Short Description
DNAJ heat shock family protein
Computational Description
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink).
Link
InterPro Scan - TAIR