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15-1265-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 55393 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -1944; Region: intergenic
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 1806; Region: intergenic
    Flanking Genome Sequence: 15-1265-1 - 3-prime edge 
    TTAAATGTAT ATGTATATAA TTCCAAATTT CCAACAATTG GTTTATAAAC 
    GATGGCACTA ACATAACCTC ATATATTGTG ATACAACGAA AGGCACCGGA 
    TGGTGGAACG CATCACGCAT CATGCATCCT CGATCCCTTT TCAAAGTGGT 
    ATGTAAGAGA TCATTATTTC AACATAACAT ACATTTGCTA TGATGACGCA 
    TTTTAGTCAA ATTAGTTGTT TGTTCAATCA TATTAATAAG GGTCAACAGA 
    TATTTATACG AACTGTAATT AAAATGATAA AATCCAAAGC GACAAGTTTG 
    CTACTACCAA ATGTGTGTTT AATATATATA ATTTAGAAAC ATTGAATTTG 
    AGAAAATGAG TATACGGTTG CACAAAAGAA GAAGAAGAAG AGGAGTATAC 
    CAACAAAAGG TTGTACGTAA TATAATTCCG ACCCCCTAAA AAGATATATA 
    ATAAGGTGGA GAGCGAGGGA TCTGAAATTG ATGGGTGTGT TTTTGTGTGC 
    ATAACAAAAG TTAAAAATGT ATTTATATTA TTTTTAATTT TAAAATTCTT 
    TTCTTACTTG TGTTTATTTA TTAGTTAAAT AAATAATTTA ATGAGAGAAG 
    CT

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR