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15-1274-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8609418 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -655; Region: promoter
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: -27; Region: promoter
    Flanking Genome Sequence: 15-1274-1 - 3-prime edge 
    GTTATGAATT GGATTTGGAT GCAAACAAAT CTCACAATTG CACTAATGAG 
    CGAATTTGTA AGGACAATTG TCAAAGTTTG AGCCTTTTCA CAGTCTCCCA 
    AAGGTTATGT CTTTGCCAAA TCTGTGTGGT TTTGTTGGTA TGGTTTAGTG 
    AAAGGTTATT TGCAAATATT ATTATTATTC AATTCACAAG TGGCCCTTTG 
    ATTTCTCTTG AAACAAGGAT TTGCAACTAC TATATTGTTG CATTTTCATG 
    AGCTCTTAAA ATTGATAAGC AATACTAGTA GTGGCCCTAA GCAAAAAAAA 
    AAAAAAAAAA ANTTTNGGNA AAAANAAANT CNAAATTNGG NTTTNNNNNC 
    CNAAANNNAA AANNAAAAAC CCNTTNGNNC CNGGGGNNNN TTTTTNAAAA 
    NNNNNNTTCC NAAAAAAAAA NTTTTTTNNN NTNAAAAAAN NNNTTTTTTT 
    NNNNNNNNNT NAAAATTTTT TNNANNNTNN NNNAAAANCC CNGGTTTTAA 
    ANNNAAAAAN GTTAAAAAAA ATTTTTNNCC CNGNCCCNNG NNANAANAAA 
    AANTNTTNGN NAAAANTTTT NCCCTTCNNA AAAAACTTTT TTTTTGAAAA 
    AANCCTTTTA AAAAAANNNC CTTTTCCCGG GAACNNTNGG GAANNANCCC 
    NNNTTGGNNA AANAGNNNAN TNNNNAAAAA AAAAAAAAAA ANNCTCCTTT 
    TTTTTTAAAA AGNA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8609482 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -719; Region: promoter
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1274-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGT CTCAAATTCG AAAAATGTCG TCTCTCTCCT 
    GCCCTACCTA CCGCTCCCGC ACTTCGTCTT CGTCTCCTTT CTTGTCGAAT 
    CATCATCATT CTTCGCTGAT CAATGTTGTT GACCCACGCC GCTCACTCTC 
    CTTCCACTAC GCTTCTCCTC AGGGGCTTAA TCTAGCTGAG CTCTGTGTTG 
    TTAGATCGCA GAGGAGGTCC GTTCAGAGTT CTGTTGTCGT GCAAGATGGT 
    AACTTTAATT GGATTCTCAA TTGGGTTTTC TTCTTTATGC CTTGCTTTGC 
    CGGTAACTTG AAAGCT

AT1G24270.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24280.1

Model type
Protein coding
Short Description
glucose-6-phosphate dehydrogenase 3
Curator Summary
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.
Computational Description
glucose-6-phosphate dehydrogenase 3 (G6PD3); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 8421 Blast hits to 8407 proteins in 2362 species: Archae - 0; Bacteria - 5801; Metazoa - 904; Fungi - 180; Plants - 375; Viruses - 4; Other Eukaryotes - 1157 (source: NCBI BLink).
Link
InterPro Scan - TAIR