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15-1286-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7295540 [Map]; Strand: c
      • AT1G20930.1 - [+] show detail - cyclin-dependent kinase B2;2
        Distance: -794; Region: promoter
      • AT1G20940.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1286-1 - 3-prime edge 
    GCCAAAGGTT CTAAACCCAT CTTTTTCACC CTCACCACAA GAGACTTGCC 
    ATCGTACATA GCTATGTTCC AATATACAAG CGTTTCTTCC TCGATAGATA 
    TGTTCTTGAT CCGCCTTGTG AGTGTCCATT TGTGATTCTC GACAAGTGTG 
    TAAACNGGAG ATTGTTTCTA TCGTCCCCGA AATTAGGGTC AGGCGATTGA 
    TCTTAACGCT TTCCGCGAAA AGTAGCTTCG TATCCGGTTC CCGATGAAAT 
    ATGGAAGGAA TCAAGCATGC TTGCTCTGTC TCGGGATTAA AAGATATGAT 
    GCTGCCATCG TTTCTCAGCC AGTGAAGAGT GTTGTCCAAG TAAACAGGTT 
    TCATCCGCGT AGTGAGATCA CTTTTTGAGC TAGTGGTGAT ACTCGTTTCC 
    GATAATCTCC AAGAGTCTCC TTCGTTGATC TCGAATCCGT ATACGGTTTC 
    CATCTCGAGT ATGCCCACGA TCTTGAATCT CTTGGTTGTT AGATTTCGAT 
    TTACCGCAAA TCCAACGGAC ATCGCTCGTT CCGACAAGCA ACATTACCTC 
    CAGGATAACT AATTTCCGCT TAAGACCTTT AAGTTCCACC ATTAACTATC 
    ATTGGGTNTA AGCTNNCANN CNGGNCNGNA ACANCNGNC

AT1G20930.1

Model type
Protein coding
Short Description
cyclin-dependent kinase B2;2
Curator Summary
Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.
Computational Description
cyclin-dependent kinase B2;2 (CDKB2;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;1 (TAIR:AT1G76540.1); Has 109034 Blast hits to 107606 proteins in 3051 species: Archae - 93; Bacteria - 11427; Metazoa - 41458; Fungi - 12141; Plants - 24398; Viruses - 437; Other Eukaryotes - 19080 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20940.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: SWI-SNF-related chromatin binding protein (TAIR:AT1G20240.1); Has 79 Blast hits to 74 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR