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15-1356-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8846195 [Map]; Strand: w
      • AT1G25240.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1356-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCATA ACCGATAAAT GGGAAATTTT CGAAGACGAC 
    TTTTGTTTCA CATGTAAGGA TATTAAAGAA ACTGATCAGC ATAGAAAGTT 
    TAACGTGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8846135 [Map]; Strand: w
      • AT1G25240.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1356-1 - 3-prime edge 
    GTTCTGCAAC TCCGGTCTCT CCACTAATAT GATACTCTTC TCTTCCTCTA 
    CTTCATCTTC CTTTTTTTTC ACCTCTTCTT CTTCTACTCC ATTGATGACT 
    TTCTCGATTG CTTTAATGTC TTCTTCCGGG ATTGTCACGA ATTTAGGAAT 
    GTCGTGCGCG TTTGAGACCC CAAATTCTTT GCAGAATT

AT1G25240.1

Model type
Protein coding
Short Description
ENTH/VHS/GAT family protein
Computational Description
ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G68110.1); Has 471 Blast hits to 436 proteins in 54 species: Archae - 1; Bacteria - 2; Metazoa - 90; Fungi - 7; Plants - 370; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR