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15-1357-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608754 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: -691; Region: promoter
    Flanking Genome Sequence: 15-1357-1 - 5-prime edge 
    ATTTTCATAA GAGGAAACAG AGTATAGAGC CTTTTTTCAT GTTTATGTAT 
    TTCACCCTCA TTAATCATTA TTATGTCTCT CGCTCATCAT ATACATGCAT 
    GATTTTTTAT TTTTTTTTAA CAAATTCAAT CAATTCACAA ATGAGCTAAA 
    TCACAATAGC TCCAGCGAAA ATGCATGATT TTTAAAATGC TTCTTTCAAT 
    GATATAGTTT TATTGTAATG GAAAAATATT TAGCAAATAG ATTATATACC 
    TTACATGAGA CAAGTATAAA TAATTATTAT AAACTTATTA AGTTTAANAT 
    CAAGGCTTTT GNGCAATGTA TCAATGAATG TTANATGTGA TATGATGAAA 
    GCAATGTTTT AAACACATAC ATAGTCATTG ATCGGAATGN GNGTTATTAN 
    AAATGCATGC CTAGGCCGAT AGGGTTATCT ATGTTTGGTC TTGGACATTA 
    TAGCCAAATT TCGAATCTAA TTCTTCCAAT ATTTTTTTTT TTTTTTTTTT 
    TNNNNGGGGN CCCCCNNANN NNGGGNTTNN NNTTTTNAAA NCCNNGNNAA 
    NGNCCCCAAT TTTNNNNGGG NNAANCCCCT TTTNAAAAAA AAAAAAAGGG 
    GCCCNNNGGG NAANAAAAAA AAAAAAATTN GGGAAAAAAC NTTTTNTNAA 
    NCCNCCCNAN AAANNCCCCC NNNTTNGGGG AAAAAAANNC TTGGGNGNAN 
    GNGAGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608679 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: -766; Region: promoter
    Flanking Genome Sequence: 15-1357-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCT TATCTGCGAA 
    AGCCATTAAG GAAAGAAACA ATAATCGCAG CAAAGAAAAC TCTCTCCTCT 
    GCTTCTCTCT CTCTCTCTAT CTAGAAAAGA AAGATTCCTC AAAATCAGCC 
    ATGAAAGTAA TGAAGAAAGG TAAAGTGCAC CCATCTCCTC CTCTTCCATC 
    TTCTTCTTCT TCGAATGGAG ATGACTCTCT TTCTGTATTT AAGCT

AT1G24270.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24280.1

Model type
Protein coding
Short Description
glucose-6-phosphate dehydrogenase 3
Curator Summary
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.
Computational Description
glucose-6-phosphate dehydrogenase 3 (G6PD3); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 8421 Blast hits to 8407 proteins in 2362 species: Archae - 0; Bacteria - 5801; Metazoa - 904; Fungi - 180; Plants - 375; Viruses - 4; Other Eukaryotes - 1157 (source: NCBI BLink).
Link
InterPro Scan - TAIR