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15-1359-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)
stem (PO:0009047)
  • desaturated green (PATO:0001272)
    (Stems::pale green)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23444191 [Map]; Strand: w
      • AT3G63480.1 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -185; Region: promoter
      • AT3G63480.2 - [+] show detail - ATP binding microtubule motor family protein
        Distance: -185; Region: promoter
      • AT3G63490.1 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: -12; Region: promoter
      • AT3G63490.2 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: -12; Region: promoter
    Flanking Genome Sequence: 15-1359-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC CCTTGGGCGT GGAGTGGATT AGGGAGACTC 
    GCACTCTTCT TCTTCTTCTT TGTACCCAGA AAGAAAGAGA GCTCCAACAA 
    TGGCTGCTTG CGCTACTCAC TCCTCTCTCA TGCTAGCATA CGCCGCCGCA 
    TCCACTCGTT CCCAGGACCT TACCCCTACT CCATCTCTTT TCTCTTTTGC 
    CAGCTCCAGA CCCAACCACT TGAGCGTCCC GCTTCTTCTC CTTGGGGGTT 
    CCAGGGACCG GAGATGTGCT GCTATTGACA GAGCTTCCAA CCACAAGTTT 
    ATTGTCTCCG CCGTGGCCGC TGAGGCTGAC CTCGACACGG AGGAGGACCT 
    GGAGCAGACC GCCACCGCCG TCCTTGATCC GCCCAAGCCT AAGAAAGGAA 
    AAGCCGCTTT GGTTCTCAAG AGAGATAGAG TATGTGCTTT ACCTACTTCA 
    ATTTCGCTTC CTTTACTCGT GAATCATCAC TTTGTTTGCT TACCCATTGA 
    CAGACAAGGT CTAAGAGGTT TTTGGAAATC CAAAAGCTAA GGGAAACCAA 
    AAAGGAGTAT GATGTCAACA CTGCTATCTC TTTGCTTAAA CAAACTGCCA 
    ACACAAGGTT TGTTGAGTCT GTTGAAGCCC ATTTCCGTCT CAACATCGAT 
    CCTAAGTACA ATG

AT3G63480.1

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63480.2

Model type
Protein coding
Short Description
ATP binding microtubule motor family protein
Computational Description
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63490.1

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 9168 Blast hits to 9162 proteins in 2816 species: Archae - 276; Bacteria - 5341; Metazoa - 152; Fungi - 277; Plants - 105; Viruses - 0; Other Eukaryotes - 3017 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63490.2

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR