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15-1400-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10135797 [Map]; Strand: c
      • AT1G29040.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: 0; Region: exon4 (3UTR)
      • AT1G29040.4 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein C...
        Distance: 0; Region: exon4 (3UTR)
      • AT1G29041.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1400-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTT CTCCGCCGAA ACCTCAACCG TCGGATCTGC 
    AACATCTTCC TCTAAATCAA CGGTGTCCAC GCTTTCCTCC GGAGTGACGC 
    ATCGAATCGC CTGACTCTCC ACCGCATCGT TACCCGAGCC GATTACACTA 
    TCCTTATCCG TATCCGAATC ACCGGATGAA CGCTGATATG GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 10135809 [Map]; Strand: c
      • AT1G29040.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant str...
        Distance: 0; Region: exon4 (3UTR)
      • AT1G29040.4 - [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein C...
        Distance: 0; Region: exon4 (3UTR)
      • AT1G29041.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1400-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG CTTAGCAGAG 
    TGATGTTCCT CTGGAATCTG CAGCGAAGAA GGAAGGTGGA GGAAAGAAAC 
    TTAAGATTCC TTTAAGGGAA GTTGTGAAAG CCATAGTTAT GAATT

AT1G29040.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29040.4

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G29041.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR