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15-1429-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8271910 [Map]; Strand: c
      • AT1G23310.2 - [+] show detail - glutamate:glyoxylate aminotransferase
        Distance: 0; Region: exon1 (5UTR)
      • AT1G23310.1 - [+] show detail - glutamate:glyoxylate aminotransferase
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1429-1 - 3-prime edge 
    ACTGAAATTG ACGAAGAGGA TTTGTCAGAC AAAAGTCAAT TCACGATATC 
    TCTATATCCG TGTCTCGTTT TTATGCTACG AAGACCGTTC TTGCTTAATT 
    ATAAAAATAG AAGCAGATAA TTTTTGAAGA GAATAAAAAT GTGGTGGAGA 
    TTCCAGACGA AGAGATTGTT AGTTTTGTCA TGTTATGGAC TGTTTTTCTG 
    AGTAAATTAT GCGTTTGGAA CATGACCAAT TGGGTCGATC CACGTGTCCG 
    TCGTTTTTGT TTCGTCCTCT TTAAGACGCA GCAGCCAGCA GCTTTGTGTT 
    TACTAGTAAT CTTTGGGCCT ATTGGCTCCT CATACTCTCA AAAGGCTTAA 
    GCTATATGGG CAAGAGTTGT TTTGCCACTT CAATTTTGAG AATTGACAAG 
    TGAATGATAG AACTCAAGAC TTCATAAGTG AATCAATATG AGTTGTTTAT 
    TTTTTCTTAA ACCCTTTCTA TCAATAATTT CTTTTGTATT AAGAATCGAT 
    ACGAAAAATA TCACCTTGTT AAGTTTCATA TCCCGAATTG GATTTTATTT 
    AAGGACTAAA AATGTAAGGC TTAGGGTGTG ACTGGTTACG GCGGTTGGGA 
    CGGACAAAAC CGTCACCGGA TCAGACCGCT TTTTATTTAC CATTAATCAA 
    TTTTAGTTTG CAGGGGNCCC GGACCNNAGN AATNNAAGAA AACCCGCNGC 
    GGGCCATTNG CGGACCCTTT TT

AT1G23310.1

Model type
Protein coding
Short Description
glutamate:glyoxylate aminotransferase
Curator Summary
Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.
Computational Description
glutamate:glyoxylate aminotransferase (GGT1); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, peroxisome, chloroplast, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: alanine-2-oxoglutarate aminotransferase 2 (TAIR:AT1G70580.4); Has 27976 Blast hits to 27968 proteins in 2949 species: Archae - 777; Bacteria - 19095; Metazoa - 617; Fungi - 736; Plants - 1276; Viruses - 0; Other Eukaryotes - 5475 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G23310.2

Model type
Protein coding
Short Description
glutamate:glyoxylate aminotransferase
Curator Summary
Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.
Computational Description
glutamate:glyoxylate aminotransferase (GGT1); FUNCTIONS IN: glycine:2-oxoglutarate aminotransferase activity, L-alanine:2-oxoglutarate aminotransferase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: apoplast, chloroplast, peroxisome, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: alanine-2-oxoglutarate aminotransferase 2 (TAIR:AT1G70580.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR