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15-1450-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108065 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1450-1 - 5-prime edge 
    CTTGGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
    TTTCCCATCC TACTTTCATC CTGAACACTA AGATCTATCT CCTGCATCCT 
    CCCTCTCTGC GCCTCCTGGT CCTGCCACCA AAAACACAAA CAATCATCAC 
    AGTCAACTAA ACCTTCTTCT AATTGGATCT AAACAAACAA TTCATGGCTC 
    TCTAAGAAAT ACTACTTGAG GGTTAGGGCT TGACATCTCC GGTTTGGATG 
    ATAGTAACAA CGGAATGCAA TTCATTCTAT CGGATGAACA AATTGGTTTA 
    GGCAAACAAA GAACTTTGTC AAAGACACGA CAACACTTTG CTCTACGGAT 
    C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108062 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1450-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAA 
    CACTATAAAG TCCCATGGAG GAAGAGTCGC TTCTAAACAC AAGCACGATT 
    GGATCATACT CGTCATCTTG ATTGCCATCG AGATAGGCTT GAACCTCATC 
    TCTCCTTTCT ACCGCTACGT GGGAAAAGAC ATGATGACTG ACCTCAAGTA 
    CCCTTTCAAG GACAACACCG TACCTATCTG GTCTGTCCCT GTGTACGCTG 
    TGCTTCTTCC CATCATAGTG TTCGTCTGCT TCTACCTGAA GAGGACATGT 
    GTGTACGATC

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR