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15-1454-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 466216 [Map]; Strand: w
      • AT4G01070.2 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -2660; Region: intergenic
      • AT4G01080.1 - [+] show detail - TRICHOME BIREFRINGENCE-LIKE 26
        Distance: 175; Region: intergenic
    Flanking Genome Sequence: 15-1454-1 - 5-prime edge 
    CAAGTACNTA TCNGCTGANC CAAATGTTTG TAGCTGCTCT CTGTNNNATG 
    CTTTTATTCT TGACATAGTT TATTCANCAT ACTATTACAG TCACTGCTTG 
    CTTCTTGTTA TCGATCTCCG GCCTTGTTAT ATGGTTGAAT TTAGATTAGA 
    TTCATGTCCT CGTAGTGGTG CTAAGTTAAC TTTCCAAGCC CAAGTCGTTT 
    TTTCAGTTTG TGATCCCTAC TTGGTCTCTC CAGTCACATA ACAGGTGTAA 
    CAAGCTACTG ATTAAAGAAA ATGCAGAGCA TACATTACAA GTTTGTTTTT 
    ACATCACAAG TCCTAGTAAG ATCATTATTA GCTTTCCACA GAACAACACC 
    TTAAACAAAA TTCACACTGC AAAATTTTGC ATCGTTTATT CTTGTTTAGA 
    ACCATTACAA AATTAAAATA TAGAACTATC ATATACGAGA CATTGACAAG 
    TGGAATGGCT ATTGACTGTA ACTAGCTACA AGCGATATCG TGGTACATTA 
    ACCGGTTAAA TCGTATAGTT CCCGTTCCCG GTTAAGCGTG GTTTCCACCA 
    TCACATCATT CCATGAATCA ATTGGACCAG GTAAGCACCA ATGCAGACAA 
    TCATTCTGAA CATTGCTCTT ATTCTTAACT CCANCAAAAG GATTNGGATG 
    CCTGTACGGN CCCGGATGCC CATCTGGACG GA

AT4G01070.2

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Curator Summary
the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta
Computational Description
GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1).
Link
InterPro Scan - TAIR

AT4G01080.1

Model type
Protein coding
Short Description
TRICHOME BIREFRINGENCE-LIKE 26
Curator Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Computational Description
TRICHOME BIREFRINGENCE-LIKE 26 (TBL26); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1); Has 1341 Blast hits to 1324 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1336; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR