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Mutant Lines
15-1458-1

15-1458-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 108068 [Map]; Strand: w
- AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon2 (CDS)
- AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
  Distance: 0; Region: exon1 (CDS)

NGGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTG AACACTAAGA TCTATCTCCT GCATCCTCCC 
TCTCTGCGCC TCCTGGTCCT GCCACCAAAA ACACAAACAA TCATCACAGT 
CAACTAAACC TTCTTCTAAT TGGATCTAAA CAAACAATTC ATGGCTCTCT 
AAGAAATACT ACTTGAGGGT TAGGGCTTGA CATCTCCGGT TTGGATGATA 
GTAACAACGG AATGCAATTC ATTCTATCGG ATGAACAAAT TGGTTTAGGC 
AAACAAAGAA CTTTGTCAAA GACACGACAA CACTTTGCTC TACGGATC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 1495897 [Map]; Strand: c
  - AT1G05170.2 - [+] show detail - Galactosyltransferase family protein
    Distance: -1649; Region: intergenic
  - AT1G05180.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: 2217; Region: intergenic
Flanking Genome Sequence: 15-1458-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTA 
GGTGGACTCT AATTCTTTTT CTCAACCAGG TTTCTGAACT CAATCGTGAG 
GAAAAAAATA TATTCAAGTT TTTGTTTCCT TCACGTAATA TTCCATCGAT 
GGCTGTGCTC ATGGCATGTG AGCAATCAAA AGGTCGGTGC NTGTTTTGAA 
TAACAAACAG AGAGACTGCA ATGAATTGAT TGGATCAATG TTATCCACTT 
CTATTTTATG TTAATAAGCT
```

AT1G05170.2

Model type: Protein coding
Short Description: Galactosyltransferase family protein
Computational Description: Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT2G32430.1); Has 1305 Blast hits to 1290 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 665; Fungi - 0; Plants - 601; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05180.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary: Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.
Computational Description: AUXIN RESISTANT 1 (AXR1); CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: AXR1-like (TAIR:AT2G32410.1); Has 6539 Blast hits to 5902 proteins in 1375 species: Archae - 158; Bacteria - 2625; Metazoa - 1326; Fungi - 867; Plants - 442; Viruses - 0; Other Eukaryotes - 1121 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01180.1

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01180.2

Model type: Protein coding
Short Description: phosphatidic acid phosphatase 1
Curator Summary: Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description: phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR