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15-1504-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6929833 [Map]; Strand: c
      • AT4G11390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-1504-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTCTGCAGGC TATATTACTT GCCGAGGAAA CAGCAAAGAA GGAGCCTGAT 
    TATGCGGATC GAATGCAGGT ATTCTAATTT CTGAACATTG AAATTAGTTT 
    GTTGGATTGC AATTAGGGAA TGTCTATGAC TATGTCGTGT GTATGTTCTG 
    GATGCAGTTG CATTTTGTGC CTTTAGTAAG CTGCTCGATA TGCAAACGTT 
    TGGAAGTTGT CGTGAACGAT ATCAGCCAAA CTGGGCATGG AGATCGCTAT 
    AAGGTTTTTC TTCTTTTCCT TAATAAGCAA GATAAATACA ATTAACTAAA 
    CGGACATAAG AAAGAGATGG TACTAGTGAG TATATATAAG CCATGGACAT 
    CTTATAGATT GTAACATCAT GATCTTCTTC TCTTAGGGGG GAAATAAATA 
    AATCCTAATA ATCACATTTT GATTTTGTTT CTGCATCTAG CTGGTGTGTA 
    TGTACTGTAA ATATTGCTGC TATGCCTCAA CGAATAAGGT ACTAACTCTG 
    AAAAGACACA TATATGGAGG ATTTGAAGAC CAACGACTCG AACCCTGACA 
    ACAATCCTGA AGCCTCCAAG AAACAANAGT AAAAGGGGTT CCAACTTTTA 
    ACTTTATGTT TANAGTTACN AGTCTGAATT ACCANNCNGG GCCGNNNACC 
    ACNCTGNCCC NNNA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6929769 [Map]; Strand: c
      • AT4G11390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 15-1504-1 - 5-prime edge 
    CGCTGCAGCT GAATCCCAGA AGAAAAAAAC TCACTCTTTA GTCGTTTATA 
    CTCACTAATA TCTGCTTACT ATGAAACAGA GCAACAACAT TCATAAGAGC 
    TCTGAATGAC ACATATGCCA GTGAAATTAA AATACCTGCG TTCGATCGTC 
    ATCATCAGAC TCCTTCTTTG TTGTTTTCAA AACATATAGA ACCTCCAGCT 
    GAATCCCAGA AAAAAAAAAA NACNCNCTNT TTAGNCGTTN ATNCNCNCNA 
    ANNTTGGCTN ACTAGGGGAN CANCNTTCNT AANANATNNG ATTNGACNTN 
    TTNGCAANCN AATNAAGNNA CCAGCCNGGG CCGNAAACNG NCCGNGCCCT 
    TTTATTTTAN NTNNGGGNAA CANNCTAACA TANCNGGTNN TNCCAAAAAA 
    CANTNNGNAN CATAACANGN NNGNANCCTT AAAATNNNNG GGGGGGACNN 
    GTNCAAAANN TTNGAAAACT NTNCCNANNN TTNTNCNAAN NGNNCGNNNN 
    NNANANNTNN NNNNNNGAGG GNNGAANNNN NNCCNT

AT4G11390.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G11550.1); Has 1109 Blast hits to 539 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1107; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR