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15-1562-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 128606 [Map]; Strand: c
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 15-1562-1 - 5-prime edge 
    NGATAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATNNNN 
    NCATCCTACG TTTCATCCTG CACATCCTTG CAGGCTTGGT TTGCTCGATG 
    ACAATCCCGG TTGTTTACAT GCAATTTCAA GAGCTCATTG ACAGTTTCAT 
    GGGGAAAGTA TCACAAGAGA AGAACAATTT ACTTGAAGTA TTCAAACAAG 
    TTGTCGTCTA AAATTNCTAG GGCCCCCAAG GTGGAGTANT TCATGACCGG 
    ACTGAAAGCC AACCAACCTN TATATGCTAT GATCATATNN CTAGNAGTAA 
    AATACCGAGT AAAAAGTATA GAGCTACATA ATCAGATATT CANATGTATG 
    CAGCNCTNAC ATTGATNGAT TAAGNTCNGA TCCCTNTTTA TTNCTGNATT 
    GAAACAAAAA ANNAANCCCC ANANNAGATG GTNNTNNNNN AGNACAANNN 
    NAATNANGNN NACGACNTTN NGNCATNANC NNGTTATATN TNTTTGNGGN 
    NNTACTTTNA TNCCNCNCNT ANATANNTAN AAAANCTCTA ACNANTTNAN 
    TTTACTANAA NTCCNTATTN TATNNATTTA CNNNNNAAAA ANNNAAAATT 
    ANAANATATA NANNNNNNNA NGAANNAAAA ANANGNNNNA ANANTAATAA 
    TATATGAANT NNANCAATNA AATANANACT NCNNNNNATA TANCNNNNCN 
    NANAACAGGN NNANAAAAAN ANCNANAAGN GNNNNNCNNA NATCNNNGNA 
    AGTATNTANN GAGNNNAANN NCNNNTANAA NCNAANAAGT ACANANATCG 
    NNACNNAGNN AGANATNCNN ACNNNCN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176669 [Map]; Strand: c
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: -262; Region: promoter
    Flanking Genome Sequence: 15-1562-1 - 3-prime edge 
    GTTAATAGAC GTCTCTCCAC TATACCCTAT ACTTAGACTA TCAGGGCGAA 
    TCATGGATAT CTTTGTTACT GTAATATTCT TAAATATAGG CCCACCTTTC 
    AAATCTTGAA TCAATCGGTC GGCTTTTTAG GCCCAAATAA ACCTTTTTAT 
    TACTAGACCT CGTAAGTGAC CAAAATGGAA AAAATGTCAA AAAAATCATA 
    AATTTTTAAA TTTGAAGCGA AAAAGCATAA ACTTTCGAAA TGTTATTAAA 
    ATCCTAAAGT TTAGTTTGAC TTTATTATAA ATTAGTTAAA TTTGATTGAT 
    TGGATCATTT TAGGCATATT GATAAATTTC CATTAATAAA AAGATGACAT 
    AGTTAACTTT TCGTAATTAA CTTTTCGTAA CGTTTGGAAA ATAAATCAAT 
    TTTATACATA CATATGAGGT ATCGTTAAAA AGAAAAACTA GTACAATGTA 
    TAGTGAAAAA GCT

AT2G01240.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR