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15-1568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18122330 [Map]; Strand: w
      • AT4G38820.1 - [+] show detail - unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bac...
        Distance: -355; Region: promoter
      • AT4G38830.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 26
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1568-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    TATTTCTGTT GATCATTGTC TAAATTGTTA GAACGGGATT TAACACGCCA 
    TTAGGCGTTG ACCTTTGACT CTGTTCATCT TTGAAACGTT TGTTTATTGT 
    AAGCTAGGCT GTTTTGAAAA TTCGACAATA ATTCATAGAA TTATGAGTTT 
    GTTTATCGAT TTTAGACGCT CGTGTCAATG TCATGGAGCG GATGGCGGGT 
    ATAGTTTTAT GTTGTAATGC ACAACTTGTT CTGTTTCTTG TCAGCAAATA 
    AAAACTACTT GTTAATCAGC ATGTTGTCAA AGTTCCCCTA AATTATAGTA 
    TATAATGTTG AAGGAGAAAA GATGGGGCAA ATATCAGACG ATAAATGTTA 
    TCTTCTATGT AAGTAATTAC ACAGCTGGGT TCTAAATATC TTCTACATCT 
    AATTAATGAC CTCAAAAATT GTTACATATA TGTGATCCTT GTGAATTGGA 
    TCTAATGAAN CTGANAANTG ACGGTGATAA ATGTATCTAC AGGGCAAGGG 
    ATGGTCAAGC CGCCCATTGG ATGATCAAAC CCAAACTCTT GTTCANATTT 
    ACTCAACAAA GCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18122337 [Map]; Strand: w
      • AT4G38820.1 - [+] show detail - unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bac...
        Distance: -362; Region: promoter
      • AT4G38830.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 26
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1568-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCNCN GAATTGNNGN NTNTTCTTCT TNCTCTGATN 
    TCACTNTTAT TCCAAATNCA ATGCTTCACC GNTAAGTCGC AACCGGNTCC 
    TGTTAAACCA AATATGCTCA AACGTCACAG GCAACTTCAC CGTTAACACC 
    CCTTACGCCG TCAACCTCGA CCGCCTCATC TCCTCTTTAT CATCTCTCCG 
    ACGTAACGTT AACGGATTTT ACAACATCTC AGTGGGAGAC TCCGATGAAA 
    AAGTCAATTC AATCTCACAG TGTAGAGGCG ATGTCAAACT TGAAGTTTGC 
    ATCAACTGCA TCGCAATGGC TGGAAAAAGA CTTGTCACGC TGTGTCCGGT 
    TCAGAAAGAG GCGATTATTT GGTATGACAA ATGTACGTTT AGATACTCAA 
    ACCGGACAAT CTTCAATAGA TTGGAGATTT CCCCTCACAC AAGTATAACG 
    GGAACAAGAA ACTTCACCGG AGATCGTGAT AGTTGGGAGA AATCTTTAAG 
    GGGTTTACTC GAAGGGCTTA AAAACAGAGC CTCTGTTATT GGTCGGAGCA 
    AGAAGAATTT TTGTTGTAGG CGAAACGAGC GGGCCTTCAT TTCAAACATT 
    GTTCGGTCTG GTTTCAGTGC ACACCGGATA TTTCCNGAAG AGGATTGTTC 
    GTATTGTTTG TCTCAGGGTA TTGCAAGATC CNAGCTGTTG TGATATGAAA 
    TGGGGNAGTA

AT4G38820.1

Model type
Protein coding
Computational Description
unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38830.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 26
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 26 (CRK26); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 124218 Blast hits to 122701 proteins in 4579 species: Archae - 106; Bacteria - 13898; Metazoa - 45472; Fungi - 10958; Plants - 35042; Viruses - 435; Other Eukaryotes - 18307 (source: NCBI BLink).
Link
InterPro Scan - TAIR