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15-1579-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3952395 [Map]; Strand: w
      • AT4G06700.1 - [+] show detail - transposable element gene
        Distance: -1793; Region: intergenic
      • AT4G06702.1 - [+] show detail - transposable element gene
        Distance: 4787; Region: intergenic
    2. Chromosome: 4; Position: 3954530 [Map]; Strand: w
      • AT4G06700.1 - [+] show detail - transposable element gene
        Distance: -3928; Region: intergenic
      • AT4G06702.1 - [+] show detail - transposable element gene
        Distance: 2652; Region: intergenic
    Flanking Genome Sequence: 15-1579-1 - 5-prime edge
    TATCGAGGTG TATTTAAAAT TANAGTANAT CTGNGAATTT GGGAAATCNA 
    GGCTACAATC TATGGAATTG GTAACAGTGT AGAAATCTTA GAAAAGTTAT
    GATCTATGGA ATCTTAGAAC AGTGTAGAAA TCGTAGTTTC ATGGTGTAGC
    CAAAGTCCAT ATGAATCTTT GGCTTCTAAC AAGGAAACAC TAATTAGGCT
    TATAAGATCG AGTTGCGGTT TAAGTTCTTA TACTCAATCA TACACCTGAA
    ATCAAGTCAT ATTCGACTCG AAAACATTAG CCAACCTTCT TCTTGCTTCT
    CAAAGCT

AT4G06700.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (En/Spm), has a 5.7e-54 P-value blast match to dbj|BAB64937.1| TdcA1-ORF1-ORF2 (Daucus carota) Spm/En-like (CACTA-like)
Link
InterPro Scan - TAIR

AT4G06702.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR