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15-1608-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8960358 [Map]; Strand: w
      • AT1G25510.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1608-1 - 5-prime edge
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAN GCNGGTGAAA CACTNACCNC TNCNTNGNGT
    NGCNCNAGGA TACATNNGAA CCTTTNNNTA CTCAGTTCCT AAGTGGGGTA
    CGNNNTGCNN ANNGGTAACG CGATCGTGCN TTCTGGATAT GTAAGTCTGN
    CGGCTCGNGG CTANACNGGC CANATCATGA CCATTATGAC TCGGGCTTGT
    GTCACNGGTT GAGTCTGGCT AGTGTGAGTG ACTTATAGTC TGAGTGTTCA
    GTTCCTCGGA CGGAAACTCG TGAATGAAGC TGCAAGCTGA AAGAAGAAGA
    AGCAGAGTGA GTCTGTTCTT CTTGCTGGTT TAACCGAAAC GACGACGTAT
    ACTTGGTTCT GTGGATGGAG TCAGCGACAT TGAGAATTGA GGTAGTGGTT
    GTGGAGGTCT CTGGTAAGAT TCTGGAGAAA ACAGAAGAGT GTGAAGTGAG
    GAAGAAGATG AAGAAGAAGA AGGAGTAGTT AGGAGACATT TTTTAGATTC
    CGACCGTTAA CAGTGAAGAA GATGAAGTGA ATGAGGTTTA TTAAAGAGAA
    NACAAAAGTG TGTTTGGTGG GGAAGGGAAA ATGANACAAA ANNT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8948688 [Map]; Strand: w
      • AT1G25480.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1608-1 - 3-prime edge
    GGAGTGGTTC TTTAAGGTAG ATGACGAAAG AACAGAGTGC GAGAGCCATC 
    CCCATCTTAA CGGAGAAGTA AACTTTCCGA CGATCGGAAC GACCCATCTC
    GTATAATTTA GCACCGATGT CGTATAAAGC T

AT1G25480.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G68600.1); Has 866 Blast hits to 864 proteins in 262 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 26; Plants - 341; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25510.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).
Link
InterPro Scan - TAIR