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15-1625-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16588930 [Map]; Strand: c
      • AT4G34760.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -6051; Region: intergenic
      • AT4G34770.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -2299; Region: intergenic
    Flanking Genome Sequence: 15-1625-1 - 5-prime edge
    GGACGTGTTT TATTTGTTGG AAGGAAATAG TAACTTCGAT AATGCATGTT 
    ATTGCCGAAA ATGTAATTAC CCTTTTAATT TATCCATATA CACTTTGTAT
    CGAACTGAAA TAAATCGTAT TGTACATATA TGCNTGTGAA TT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16589046 [Map]; Strand: c
      • AT4G34760.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -6167; Region: intergenic
      • AT4G34770.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -2183; Region: intergenic
    Flanking Genome Sequence: 15-1625-1 - 3-prime edge
    ACACGTCCCA TATCTGCCAA TTTATATTTG AAAAGTTGTC ATATATTAGA 
    CGCCCCCTCT GTAATTTAGT GGGTCACATC ACATGCTCTC TAATTATTTC
    ATATGAGAAG CCATTATCCG AAAAAAAGAA GATGATAGAT GTAAAGCCAC
    NGAAAATGAG AATTGCAGAA ACATGGATAT CCACGAATGG ACCGTCACAA
    GATCTTCCAA TAATATTTAG CTTTTTTCAG TCAAACGTAG ATAGTCAGTG
    AGTTGATGAT GAAGCCCTCG TGTTGTACGT AGCTGCCAAA CACTAACATA
    TTCAAATCCA CCCAATTAAT AAAGCT

AT4G34760.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G16580.1); Has 1475 Blast hits to 1458 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1474; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34770.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21210.1); Has 1411 Blast hits to 1394 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1410; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR