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15-1633-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9330019 [Map]; Strand: c
      • AT4G16563.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1633-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA AGGGTTTGAG GTGGTTTATG ATCTGTTGAA 
    CAGAAGAGTT GGGTTTGCTA AGAGGAAGTG CGCATCTTTA TGGGATTCGC 
    TTAAATAAGC CTAACATGCG CTGAAGCCAA TAAATCTTTG AAATAAGCCT 
    AACATGAGCC TCTCCGGTTT GACCGGTGGA CCGGATTGGT TATGATCATG 
    TTTTGGGGAT GAGGTCTTAT CGAACAGTAA TTACGTTGTT GGGAAGTACG 
    TAAAATAGAT GTAGCTAGCC TCAATAATTT CGATGAAACC ATACTCGAAA 
    AGTACATAAA AGTGTTTAAA ATTTTCAAAT AGATGCCATA TTAATTTTGT 
    TTTATCGTCA TAATTAAAAG AGGTTGTTAT ATTAGTATAT GTTGGTTAAG 
    CATCGCTTTT TAAAATTAAT TGAGAGCCAA TTTTAATAAA TAGTAGTATT 
    AAATTTACAC CAAATAGGAT AGGTATATAT GAAGTAGCAA TTAGGGGGGA 
    GGTACCAAAA TTTCTTTAAT GACTAGTAAC CATAGATGAT GAGGCGACCA 
    AGAAGTTGAT AATTATTGAT TTGTTTCAAG AGAGATTGAC TTGCGATAAA 
    AGTCTAGAGA GGCGGAAACA GCAAACACGT TGGTGTTCCG CGTCTTCTTA 
    GTTCTTACAG TGAATTATTT ACACGTAGAC CAAACCCACT AGACCTCAAA 
    AGGAATATGT AAAACTGTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9330021 [Map]; Strand: c
      • AT4G16563.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1633-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTACTTGCTG GTAATTCCCC AGAATAGCCC CAGTACCACC TCGAAGTTCT 
    GATTCATCTC CACCGTTCAT CAACATCAAA CATCCAATTT TCCTCTTCTC 
    TTCTTTACCA TCTCCACCGT CCATAAATTC GTAAAAATAA TTTCTCCTGG 
    GGAGCGTCAC ACTGGATCTG TTCCCGGCAA AATGCAAAAC CAGAGCTGGA 
    ACTTTAACCG TCTGGTTTAA ATAGTAACAA GGACTCATAC CCGAACTCGG 
    TTCGACCCGA TCAGCCCGTT CGTGAACCCG CCCGACCCGA CTATCGAATT

AT4G16563.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR