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15-1702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5382664 [Map]; Strand: c
      • AT5G16480.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-1702-1 - 3-prime edge 
    AGCCCATCGA CGTTTCTATC TCCCTCCTTC TCTCAATTGG GAGACAGAAA 
    GCTACGAGCA CCAAAGAGAG ACAGAGAGGG AGAGAGAGCA AAATCCCCAA 
    AATCTAGAGA GAGATAGAGA TTCGTTGAAC AAAAAGAAAA AAAAAACCCT 
    TTAANNGATT ANGGGGATAN TCNTNANGGG GGGTTNANTT TTTTTTTAAA 
    AANANCCAAA ANNATGNCAA AANTTAGGGG NTTTTTTTNT TAAAAAATTT 
    TTTNGGNTTN GNAAAAAANT NGTTAACCCT TTNAAAANCC CCCTTTAAAA 
    ATNGTTNTTG TGGGNTNNCC ACCCNGGNCC GTCANCCNCC NNGCCCCTTA 
    TAG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5382548 [Map]; Strand: c
      • AT5G16480.1 - [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-1702-1 - 5-prime edge 
    GATGGGCTTA ATTGTGGATG ATGATAACGA TGGAGAAGTT TTGATTCCGC 
    CGCCGAATTT TTCAATGGTA GAAGATGGAA TTTACCGATC TGGGTTTCCT 
    GAGCTGGAGA ATTTCGGATT CTTATCAACC CTAAATCTTC GATCCATCAT 
    GTAAGATTCT CTTCTTTCAT TCTTCTGAAT CTTTTGTTAA AAATTAAAAA 
    AAGAAGAANA ATCTTTTATT TAATCACGCA TCGNTGTCGT TGTTTATAGA 
    TAGACAGATT CCTTAAATCA CCACTTTCAC TTNCATGGNT GGTATTAAAT 
    AAATGTCAAA AAAATGTGGG AAAATAATNT ATGNGNGNNG NNNAAATTNT 
    ACCACCAACA AAAAANTNNG GGNNNGAAAA AAAATTTTGN CNNNTGGNTT 
    ANCNCANAAA ANTANCCTTT TTGCGGNANC AAAAGAGGGN GGANAAANTN 
    NCNNCCCCCN NNCNNNNTAC NNAAANNCNN NNNGNNNTNC NTNTNCCNNN 
    NNNNTTNCCC CNCACNGGNG AAAAAAAAAA AA

AT5G16480.1

Model type
Protein coding
Short Description
Phosphotyrosine protein phosphatases superfamily protein
Computational Description
Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Tyrosine phosphatase family protein (TAIR:AT3G02800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR